|
Name : MSMEG_1708 (MSMEG_1708) Accession : YP_886084.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : ribose operon repressor Function : - COG functional category : K : Transcription COG ID : COG1609 EC number : - Position : 1802474 - 1803478 bp Length : 1005 bp Strand : - Note : identified by similarity to SP:P03023; match to protein family HMM PF00356; match to protein family HMM PF00532 DNA sequence : ATGACTCGCAAACCTGTGATGGCCGACGTCGCGCGCCTTGCCGGGGTCTCCCATCAGACGGTGTCGCGGGTGATCAACGG ATCGCCGAGCATCCGGCCTGCCACGCGGCGGCGCGTCGAGGACGCGATCGCCCAACTGGGTTACCGCCCCAACACCGCGG CGCGGGCCCTGGTGACCAACCGCTCCGGCATCATCGGCATCATCGGGACCAACACCGGCCTCTACGGCCCGTCGAGCGTC CAACGCGCCGTCGAGGAGGCCGCGCGCGAGGCCGGGTACTTCTCCAGCGCCGTACCGCTGGCGTCGGTCACGCATCAGGC GATCCGCGGTGCCGTCGAGCACCTCTCCCGGCTCTCGGTGGAGGCCATCGTGATGGTGGCCGCGCAACAGGACGCGCTCA CCCTGGTGCAGTCCGAGGATTTCGGGGTCCCCGTGATCGTGGTCGAGGGTGACCTCTCCGGTGCCGGCCTGACCGTCGGT GTCGACCAGGTCGGCGCCGCACGAAAGGCCACGCAGCATCTCATCGATCTCGGCCACACCGCGATCGCCCATGTCAGCGG GCCACCCAACTTCCCCGAGGCCGCGGGACGCACCAAGGGCTACCTCGACGCCATGCTGGCCGCACGCCTTGTGCCGCACC CCGATTGGCACGGCGACTGGAGCGCGGCCCGCGGCTACGAGATCGGTGAGAAGATCGCCGCACAGCGGGAGATCACCGCG GTGTTCGTGGCCAACGACCAGATGGCGATCGGCCTGCTGCACGCGCTGCACGAGGCCGGGGTCCGGGTTCCCGACGACGT CAGCGTCGTGGGTTTCGACGACATCCCCGAGGCCGCCTATCTCATCCCGGCACTCACCACCATCCGTCAGGACTTCGCGG CGGTCGGTCGCCGCGCCATCTCCCTCGTGACCGCTCAACTCTCGGGGGTCGAGACCGACACCGCACTGCTGCCCGCGGAC CTCGTGGTCCGCGCCAGCACCGCCCCACCGCCCACAACGAAATGA Protein sequence : MTRKPVMADVARLAGVSHQTVSRVINGSPSIRPATRRRVEDAIAQLGYRPNTAARALVTNRSGIIGIIGTNTGLYGPSSV QRAVEEAAREAGYFSSAVPLASVTHQAIRGAVEHLSRLSVEAIVMVAAQQDALTLVQSEDFGVPVIVVEGDLSGAGLTVG VDQVGAARKATQHLIDLGHTAIAHVSGPPNFPEAAGRTKGYLDAMLAARLVPHPDWHGDWSAARGYEIGEKIAAQREITA VFVANDQMAIGLLHALHEAGVRVPDDVSVVGFDDIPEAAYLIPALTTIRQDFAAVGRRAISLVTAQLSGVETDTALLPAD LVVRASTAPPPTTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0036 | YP_001220775.1 | LacI family transcriptional regulator | Not tested | chp/tomA region | Protein | 8e-43 | 45 |
