|
Name : MSMEG_1543 (MSMEG_1543) Accession : YP_885925.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Virulence Product : eptc-inducible aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.3 Position : 1633314 - 1634858 bp Length : 1545 bp Strand : + Note : identified by match to protein family HMM PF00171 DNA sequence : GTGTCCGAACAGGAGAAAGCCATGACTGTTTACGCACGTCCGGGCGCAGACGGCGCCAAGATGTCGTTCCAGGCCCGCTA CGACAACTACATCGGCGGCGAGTGGGTCGCCCCGGTCGAGGGCCGCTACTTCGAGAATCCGACGCCGGTGACCGGTCAGG TGTTCTGCGAGGTGGCCCGCTCCAGCGAGGCCGACATCGACAAGGCTCTCGACGCCGCACACGCCGCGGCGCCCGCGTGG GGCAAGACCGCCCCGGCCGAGCGCGCGCTGATCCTCAACCGCATCGCCGATCGCATGGAGGAGAACCTCGAATCCATCGC GCTGGCCGAGTCGTGGGACAACGGCAAGCCGATCCGCGAGACGCTCAACGCCGACATCCCGCTGGCCATCGACCACTTCC GCTACTTCGCGGGCGTGCTGCGTGCCCAGGAAGGCTCGCTGAGCCAGATCGACGAGGACACCGTCGCCTACCACTTCCAC GAGCCGCTGGGCGTGGTCGGGCAGATCATCCCGTGGAACTTCCCGATCCTGATGGCGGTGTGGAAGCTGGCCCCGGCCCT GGCTGCGGGCAACGCCGTCGTCCTCAAGCCCGCCGAGCAGACCCCTGTCTCGGTGCTCTACCTGTTCTCACTCATCGGCG ACCTGCTGCCCGCCGGTGTGGTCAACATCGTCAACGGGTTCGGTGTGGAGGCCGGCAAGCCGCTGGCGTCGAGCAACCGC ATCGCCAAGATCGCGTTCACCGGTGAGACCACCACGGGCCGGCTGATCATGCAGTACGCGTCGCAGAACCTGATCCCGGT GACCCTGGAACTCGGCGGCAAGAGCCCCAACATCTTCTTCAACAACGTGCTCGCGCAGGCCGACGACTACCAGGACAAGG CGCTGGAGGGCTTCACGATGTTCGCCCTCAACCAGGGTGAGGTGTGCACGTGCCCGTCGCGGTCGCTGATCCAGTCCGAC ATCTTCGACGAGTTCCTCGAGCTCGCCGCGATCCGCACCAAGGCCGTGCGCCAGGGCGATCCGCTGGACACCGAGACCAT GATCGGTGCGCAGGCGTCCAACGATCAGCTGGAGAAGATCCTGTCCTACATCGAGATCGGCAAATCCGAAGGGGCCAAGC TGATCACGGGGGGAGAGCGTGCGCAGCTCGGCGGCGATCTCAACGGCGGCTACTACGTGGCGCCGACGATCTTCACGGGC AACAACAAGATGCGCATCTTCCAGGAGGAGATCTTCGGCCCGGTCGTGGCGGTCACGTCGTTCAGCGACTACGACGACGC CATCTCGATCGCCAATGACACGCTCTACGGTCTGGGTGCCGGTGTGTGGAGCCGCGACGGCAACATCGCCTACCGCGCGG GCCGCGACATCAAGGCCGGCCGGGTGTGGACCAACTGCTACCACCAGTACCCCGCGCACGCCGCGTTCGGTGGCTACAAG CAGTCCGGCATCGGGCGTGAGACCCACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTTTCGTACAG CAACAAGGCCCAGGGATTCTTCTGA Protein sequence : MSEQEKAMTVYARPGADGAKMSFQARYDNYIGGEWVAPVEGRYFENPTPVTGQVFCEVARSSEADIDKALDAAHAAAPAW GKTAPAERALILNRIADRMEENLESIALAESWDNGKPIRETLNADIPLAIDHFRYFAGVLRAQEGSLSQIDEDTVAYHFH EPLGVVGQIIPWNFPILMAVWKLAPALAAGNAVVLKPAEQTPVSVLYLFSLIGDLLPAGVVNIVNGFGVEAGKPLASSNR IAKIAFTGETTTGRLIMQYASQNLIPVTLELGGKSPNIFFNNVLAQADDYQDKALEGFTMFALNQGEVCTCPSRSLIQSD IFDEFLELAAIRTKAVRQGDPLDTETMIGAQASNDQLEKILSYIEIGKSEGAKLITGGERAQLGGDLNGGYYVAPTIFTG NNKMRIFQEEIFGPVVAVTSFSDYDDAISIANDTLYGLGAGVWSRDGNIAYRAGRDIKAGRVWTNCYHQYPAHAAFGGYK QSGIGRETHKMMLDHYQQTKNLLVSYSNKAQGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-144 | 62 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-152 | 61 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-152 | 61 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-152 | 61 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-151 | 61 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 4e-69 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MSMEG_1543 | YP_885925.1 | eptc-inducible aldehyde dehydrogenase | VFG0082 | Protein | 3e-144 | 62 |
