Gene Information

Name : MSMEG_0015 (MSMEG_0015)
Accession : YP_884434.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_008596
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein FepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 13310 - 14140 bp
Length : 831 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGACTCACACGCCAGAGAACGCGGTGCCCGACCGGTTGGGGGCCGTCGACGTCTCGATCGGGTACGACGACCGGACCAT
CATCGACGGTCTGACGGTCCAGGTGCCTGCCGATCGGGTGACCGCGATAGTGGGGCCCAACGCGTGCGGAAAGTCCACAC
TGTTGCGGGGTTTCGCCCGGTTGCTCACACCGTCGGCCGGGCGGGTGATCCTCGATGGGCACGACATCGCGACCATGCAC
ACCAAGGACGTGGCGCGCCGACTCGGGTTGCTGCCGCAGACCTCGATCGCGCCCGAGGGTATCACGGTGGCAGATCTGGT
GTCGCGTGGCCGTTTTCCGCATCAGAAGGTGTTCCGGCAGTGGTCACGTGACGACGCGGCCGCGGTCGCCGACGCCATGC
GGCACACCGGTGTCACCGAACTGTCGGCACGACTGGTCGACGAACTGTCGGGCGGGCAACGCCAGCGCGTCTGGGTCGCA
ATGGTTCTCGCGCAGCAGACGCCCCTGATCCTGCTCGACGAGCCCACCACCTATCTGGACATCGCGCACCAGGTGGAACT
GCTCGACCTGTTCGCGATGCTCAACCGCGAGCACGGCCGCACCGTGGTGGCGGTGCTGCACGATCTCAACCAGGCCTGCC
GCTACGCCGACGAGTTGATCGTCATGAAGGCGGGCCGCATCGTGGCCCAGGGCGATCCCGACGTCGTGATGTCGGCCGAT
CTGGTGCGCGACGTCTACGGGCTGGAATGCCAGATCATCGACGACCCGCAGACCGGGACACCCCTGATCGTGCCGCGGGC
GTCGCGGCACGCGCGGGTGGTCAAACGGTAG

Protein sequence : 
MTHTPENAVPDRLGAVDVSIGYDDRTIIDGLTVQVPADRVTAIVGPNACGKSTLLRGFARLLTPSAGRVILDGHDIATMH
TKDVARRLGLLPQTSIAPEGITVADLVSRGRFPHQKVFRQWSRDDAAAVADAMRHTGVTELSARLVDELSGGQRQRVWVA
MVLAQQTPLILLDEPTTYLDIAHQVELLDLFAMLNREHGRTVVAVLHDLNQACRYADELIVMKAGRIVAQGDPDVVMSAD
LVRDVYGLECQIIDDPQTGTPLIVPRASRHARVVKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-63 54
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-63 54
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-63 54
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-63 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-64 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-56 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-63 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-63 47
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 8e-50 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_0015 YP_884434.1 ferric enterobactin transport ATP-binding protein FepC BAC0164 Protein 1e-56 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEG_0015 YP_884434.1 ferric enterobactin transport ATP-binding protein FepC VFG0925 Protein 4e-73 57
MSMEG_0015 YP_884434.1 ferric enterobactin transport ATP-binding protein FepC VFG1042 Protein 1e-56 49