|
Name : MSMEG_1160 (MSMEG_1160) Accession : YP_885554.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : nitrate/sulfonate/bicarbonate ABC transporter ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 1223852 - 1224655 bp Length : 804 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : ATGAGCACCCAACCGAAGTTGCGCCTGCGTAACGTCACCAAACAGTTCGAGATCCGGGGCGAGAAGGACAAATTCACCGC CGTCGAGGACATCAGCATCGATGTGGCAGCCGGGGAGTTCCTGGTCCTGGTGGGCCCCAGCGGATGCGGGAAGTCGACGC TACTGGACCTGCTCGGCGGCCTGAGCAGTCCCACGTCGGGGGAGATCCTGCTCGACGGCGTCCCGGTCACCGGCCCGGGA CTGGACCGCGGCATCGTGTTCCAGCAGTACGCACTGCTGCCGTGGCGCACCGCGCGCAAGAACATCGAGTTCGGCCTGGA GGCCAAGGGCCTGCCCGCATCCGAACGCAAACAGCGCGCCGAGCACTACCTGGAACTGGTGGGGCTGCAGGCATTTGCCG ATCGCTATCCGCACGAGTTGTCCGGCGGCATGAAGCAGCGTGTGGCGATCGCCCGCAGCCTGGCCTTCGATCCCGAGGTG CTGCTGATGGACGAACCGTTCGCGGCGCTCGATGCGCAGACCCGCGAATCGCTGCAGGATGAACTGCTGCGGATCTGGCA GGCGACCGGCAAGACCATCCTGTTCATCACACACGGCATCGACGAGGCGCTGTACCTGGGCCAACGCGTCGCGGTGCTCA CGTCGCGGCCCGGGCGGATCAAGAAGATCGTCGACGTCGACATCGACCGTAGCGGCGAGGACGTGCGTTCGAGTTCCGGG TTCCGCGAACAACGACACCACATCTGGTCGTTGCTGCACGACGAGGTGCAACGCGCACAGACCGAGGAGGTTTCGCATGC CTAG Protein sequence : MSTQPKLRLRNVTKQFEIRGEKDKFTAVEDISIDVAAGEFLVLVGPSGCGKSTLLDLLGGLSSPTSGEILLDGVPVTGPG LDRGIVFQQYALLPWRTARKNIEFGLEAKGLPASERKQRAEHYLELVGLQAFADRYPHELSGGMKQRVAIARSLAFDPEV LLMDEPFAALDAQTRESLQDELLRIWQATGKTILFITHGIDEALYLGQRVAVLTSRPGRIKKIVDVDIDRSGEDVRSSSG FREQRHHIWSLLHDEVQRAQTEEVSHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 3e-40 | 44 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-23 | 43 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-24 | 43 |
