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Name : ctaD (MSMEG_1040) Accession : - Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_008596 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1108975 - 1110701 bp Length : 1727 bp Strand : + Note : cytochrome C oxidase subunit I; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : TTGGTAGCCGAAGCGCCCCCAATCGGAGAACTCGAGGCACGTCGTCCGTTTCCGGAACGTATGGGCCCCAAGGGGAACTT GATCTACAAGCTCATCACGACCACCGATCACAAGCTGATCGGCATCATGTACTGCGTCGTGTGCTTCGCCTTCTTCCTGG TCGGCGGCCTCATGGCGCTGTTCATGCGTACCGAACTCGCGATGCCGGGCTTGCAGTTCCTGTCCAACGAGCAGTTCAAC CAGCTGTTCACCATGCACGGCACGGTCATGCTGCTGTTCTATGCGACGCCGATCGTGTTCGGTTTCGCCAACCTGGTGCT GCCGCTGCAGATCGGCGCGCCGGACGTGGCGTTCCCGCGCCTGAACGCGTTGTCGTTCTGGCTGTTCCTGTTCGGTGCGT TGATCGCGATCGCCGGGTTCATCACCCCGGGCGGTGCCGCGGACTTCGGCTGGACGGCGTACTCGCCGCTGACCGACGCG ATCCACTCGCCGGGTGCCGGCGGTGACCTGTGGATCATGGGCCTGGCCGTCGGTGGTCTGGGCACCATCCTCGGTGGCGT GAACATGATCACCACCGTGGTGTGCATGCGCGCACCGGGCATGACGATGTTCCGGATGCCGATCTTCACCTGGAACATCC TGGTGACGTCGATCCTGGTGCTGATCGCCTTCCCGATCCTGACCGCGGCGCTGTTCGGCCTGGCCGCCGACCGCCACCTG GGTGCCCACATCTACGACCCCGCCAACGGCGGCGTGCTCCTGTGGCAGCACCTGTTCTGGTTCTTCGGTCACCCCGAGGT GTACATCATCGCGCTGCCGTTCTTCGGCATCGTCTCCGAGATCTTCCCGGTGTTCAGCCGCAAGCCGATCTTCGGTTACA CCACGCTGATCTACGCCACGCTGGCCATCGCGGCCCTGTCCGTCGCCGTGTGGGCCCACCACATGTACGCCACGGGCGCG GTGCTGCTGCCGTTCTTCTCGTTCATGACGTTCCTGATCGCGGTGCCGACCGGTATCAAGTTCTTCAACTGGATCGGCAC GATGTGGAAGGGCCAGTTGACGTTCGAGACGCCGATGCTGTTCTCGGTCGGCTTCCTCATCACGTTCCTCTTGGGCGGCC TGTCCGGCGTGCTGCTGGCCAGCCCGCCGCTGGACTTCCACGTGACCGACAGCTACTTCGTCATCGCGCACTTCCACTAC GTGCTCTTCGGCACCATCGTGTTCGCCACCTACGCGGGCATCTACTTCTGGTTCCCGAAGATGACGGGCCGCCTGCTCGA CGAGCGGCTGGGCAAGCTGCACTTCTGGCTGACGTTCATCGGCTTCCACACCACGTTCCTGGTGCAGCACTGGCTGGGTG ACGAGGGCATGCCGCGTCGTTACGCCGACTACCTGCCCACCGACGGCTTCACGACGCTGAACGTGATCTCCACGGTCGGT GCGTTCATCCTGGGCGTCTCGAGCTGCCGTTCGTGTGGAACGTGTTCAAGAGCTGGCGTTACGGCGAGCCCGTCACGGTC GACGATCCGTGGGGCTACGGCAACTCCCTGGAGTGGGCCACCAGCTGCCCGCCGCCGCGGCACAACTTCACCGAGCTGCC GCGTATCCGGTCGGAGCGTCCGGCGTTCGAGCTGCACTACCCGCACATGGTCGAGCGGATGCGGGCCGAGGCCCACGTGG GTCGCGCCCACCATCCCGAGCTCGAGACCGCGGACAAGTCCAGCTGA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | DNA | e-277 | 80.2 |
