Gene Information

Name : MAV_5037 (MAV_5037)
Accession : YP_884155.1
Strain : Mycobacterium avium 104
Genome accession: NC_008595
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 5185877 - 5186716 bp
Length : 840 bp
Strand : +
Note : identified by match to protein family HMM PF00665

DNA sequence : 
GTGGCCCTGAGCACCTACTACGACACCAAAGCCCGGGTCCCATCGGCGCGGGCCCTGCGCGACGCCGTCCTCGGGCCGGC
GTTGTGCCAGCTCTGGAAAGACAACTACTGCGTCTATGGGGCCCGCAAACTCTGGAAAACCGCCCGCCGCGAGGGTCATG
ACGTCGGCCGGGATCAGGTGGCCCGGCTGATGCGGGCCGCAGGCATCGAGGGAGTCCGGCGCGGCAAACGGGTCCGCACC
ACCAAAGCTGACCCAGCCGCGGCGCGGCACCCGGACTTGGTGCACCGCAACTTCGCCGCGGCTGCCCCGAACCAGCTCTG
GGTGACCGACCTGACATTCGTGCCGACCTGGGCCGGGGTGGCCTACGTGTGCTTCATCATTGACGCACACTCGCGGATGA
TCGTGGGGTGGCGGGTAGCCTCGCATATGCGGACCTCGATGGTTCTCGACGCGTTGGAGATGGCGCGTTGGTCACGCGGA
ACTACATTGCAGGACTTGATATGTCACTCAGATGCCGGGTCGCAATTCACCTCCATTCGCTACGGGGAAAGGCTCGCTGA
GATCGGCGCAGTCCCGTCAATCGGGACCGTCGGGGACAGTTTCGATAACGCTCTCGCGGAGACGGTCAACGGCTACTACA
AGGCCGAACTGATCTACGGCCCCGCCCGCACCGGGCCATGGAAAACCGTCGAAGACGTCGAGTTGGCGACGCTCAGCTGG
GTCTACTGGCACAACACCAGCCGACTACACAGCTACCTCGGCGACATCCCACCTGCCGAGTTCGAAGCTGCGTTCTACGA
TGCATACCGGACCGACCAACCCTTGATCGGAATCCAATAG

Protein sequence : 
MALSTYYDTKARVPSARALRDAVLGPALCQLWKDNYCVYGARKLWKTARREGHDVGRDQVARLMRAAGIEGVRRGKRVRT
TKADPAAARHPDLVHRNFAAAAPNQLWVTDLTFVPTWAGVAYVCFIIDAHSRMIVGWRVASHMRTSMVLDALEMARWSRG
TTLQDLICHSDAGSQFTSIRYGERLAEIGAVPSIGTVGDSFDNALAETVNGYYKAELIYGPARTGPWKTVEDVELATLSW
VYWHNTSRLHSYLGDIPPAEFEAAFYDAYRTDQPLIGIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-42 52
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-42 52
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 5e-41 51
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-47 51
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-50 51
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-46 50
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 1e-36 50
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-46 49
Z1198 NP_286733.1 transposase Not tested TAI Protein 6e-48 49
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-46 49
Z1638 NP_287141.1 transposase Not tested TAI Protein 6e-48 49
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-47 49
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-48 49
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-48 49
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-47 49
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-46 49
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 8e-48 49
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 8e-48 49
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 8e-48 49
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-47 49
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-47 49
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-48 49
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-30 48
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-44 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAV_5037 YP_884155.1 transposase VFG1602 Protein 1e-44 47