Gene Information

Name : MAV_4425 (MAV_4425)
Accession : YP_883560.1
Strain : Mycobacterium avium 104
Genome accession: NC_008595
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4560500 - 4561195 bp
Length : 696 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGACCATCGAAATGGCCGGCGTGGTGCGCGAGTACCGGGTGGGCGGTCAACCGGTGCGGGCCCTGGACCGGATCAGCCT
GCAGCTGGCCGGTGGGCAGTTCGTGGCGGTCGTCGGGCCCTCCGGCGCGGGCAAGAGCACGTTGCTGCATCTGCTGGGCG
CGCTGGACTCCCCCGACTCGGGTTCCATCCTCTTCGACGGCGAGGAGATCGGCCGGCTCGGCGACGAGGCGCAGTCGCGG
TTCCGCCATCGCCGGGTGGGCTTCGTGTTTCAGTTCTTCAACCTGTTGCCCACCCTGTCGGCCTGGGAGAACGTGGCGAT
CCCGCGGTTGCTCGACGGGGTGCGGCTGGGTCGGGCCAGGCCGGACGCGCTCCGGCTGCTGGAGCGGGTGGGCCTGGGCA
ACCGCACCGAACACCGGCCCGCGGAGCTGTCCGGCGGCCAGATGCAGCGGGTCGCGGTGGCGCGGGCGCTGATGATGGAC
CCGCCGCTGATCCTGGCCGACGAGCCGACCGGCAACCTGGATTCCTCCACCGGCGCGGCCATCCTGGAGCTGCTGGCCGA
GGTGGCGCACGAGGGCGGCGGTGACCGGCTGGTGGTGATGGTGACCCACAACAGCGACGCCGCGGCGGCCACCGATCGGG
TGATCACGCTGCAGGACGGCCGGGTCGGTTCGGACGTGCTGGCGGTCGCCGGGTGA

Protein sequence :
MTIEMAGVVREYRVGGQPVRALDRISLQLAGGQFVAVVGPSGAGKSTLLHLLGALDSPDSGSILFDGEEIGRLGDEAQSR
FRHRRVGFVFQFFNLLPTLSAWENVAIPRLLDGVRLGRARPDALRLLERVGLGNRTEHRPAELSGGQMQRVAVARALMMD
PPLILADEPTGNLDSSTGAAILELLAEVAHEGGGDRLVVMVTHNSDAAAATDRVITLQDGRVGSDVLAVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAV_4425 YP_883560.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-39 46
MAV_4425 YP_883560.1 ABC transporter ATPase NC_012469.1.7686878. Protein 1e-47 45
MAV_4425 YP_883560.1 ABC transporter ATPase CP001581.1.gene798.p Protein 3e-39 44
MAV_4425 YP_883560.1 ABC transporter ATPase CP001581.1.gene598.p Protein 2e-40 42
MAV_4425 YP_883560.1 ABC transporter ATPase NC_012469.1.7685735. Protein 3e-37 41