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Name : ctaD (MAV_3908) Accession : YP_883070.1 Strain : Mycobacterium avium 104 Genome accession: NC_008595 Putative virulence/resistance : Unknown Product : cytochrome C oxidase, subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 4037109 - 4038740 bp Length : 1632 bp Strand : - Note : identified by match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : ATGATCGGCATCATGTACACCGTCACCTGCTTCGCCTTCTTCTTCATCGGCGGGCTGATGGCGTTGCTGATGCGCACCGA GCTGGCCGCGCCCGGGCTGCAGTTCCTGTCGAACGAGCAGTTCAACCAGCTGTTCACCATGCACGGCACGATCATGCTGC TGCTGTACGCCACCCCGGTGGTGTTCGGTTTCGCCAACCTGGTGCTGCCGCTGCAGATCGGCGCGCCCGACGTGGCCTTC CCGCGGCTCAACGCCTTCTCGTTCTGGCTGTTCCTGTTCGGCGGGCTGATCGCGGCGTCCGGCTTCATCGTGCCGGGCGG GGCCGCCGACTTCGGCTGGACCGCCTACACCCCGCTGTCTGACGCCGTGCACTCGCCCGGCGCCGGGGGAGACCTGTGGA TCACCGGCCTGATCGTCGCCGGTCTGGGCACCATCCTGGGTGCGGTCAACATGATCACCACCGTGGTCTGCATGCGCGCG CCCGGCATGACGATGTTCCGGATGCCGATCTTCACCTGGAACATCCTGGTGACCTCGATCCTGATCCTGATCGCCTTCCC GATCCTGACCGCGGCGCTGTTCGGGCTGGCCGCCGACCGCCATCTGGGCGCCCATGTCTACGACGCCGCCAACGGCGGAG TTCTGTTGTGGCAGCACCTGTTCTGGTTCTTCGGCCATCCCGAGGTGTACATCATCGCGTTGCCGTTCTTCGGGATCATC ACCGAGATCATCCCGGTGTTCGCGCGCAAGCCGGTGTTCGGCTACACCACGCTGGTGTACGCGACGCTGTCGATCGCGGC GCTGTCGGTCGCGGTGTGGGCGCACCACATGTTCGCCACCGGAGCCGTTCTGCTGCCGTTCTTTTCGTTCATGACGTACC TGATCGCGGTGCCGACCGGGATCAAGTTCTTCAACTGGATCGGCACGATGTGGAAGGGGCAGTTGACATTTGAGACGCCG ATGCTGTTCTGCGTCGGCTTCCTGCTCACCTTCCTGCTGGGTGGTCTGACCGGCGTGATGCTGGCCAGCCCGCCGCTGGA CTTCCACGTCACCGACACCTATTTCGTGGTCGCGCACTTCCACTACGTGCTGTTCGGCACCATCGTGTTCGCCACCTTCG CGGGGGTCTACTTCTGGTTCCCGAAGATGACCGGCCGCCTGCTCGACGAGCGGCTGGGCAAGCTGCACTTCTGGTTGACG TTCATCGGGTTCCACACCACCTTCCTGGTGCAGCACTGGCTGGGCGATTTGGGCATGCCGCGCCGCTACGCCGACTACCT GCCCAGCGACGGCTTCCAGCCCTACAACGTCGCCTCCACGGTCGGGGCGTTCATCCTGGGCGCCTCGATGTTCCCGTTCG TCTGGAACGTCTTCAAGAGCTGGCGCTACGGCGAGGTCGTCACCGTCGACGACCCGTGGGGTTACGGCAACTCGCTGGAG TGGGCGACCAGCTGCCCGCCGCCGCGGCACAACTTCACCGAGCTGCCCCGAATCCGTTCGGAGCGGCCGGCATTCGAGTT GCACTACCCGCACATGGTGGAACGGCTGCGCGCCGAGGCGCACGTGGGTCGCGCGCACGGCCCGGCGGACAAGGACGTCA CCCGGCTGGACGACGTCCAGGTTCGCAGCTGA Protein sequence : MIGIMYTVTCFAFFFIGGLMALLMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLLYATPVVFGFANLVLPLQIGAPDVAF PRLNAFSFWLFLFGGLIAASGFIVPGGAADFGWTAYTPLSDAVHSPGAGGDLWITGLIVAGLGTILGAVNMITTVVCMRA PGMTMFRMPIFTWNILVTSILILIAFPILTAALFGLAADRHLGAHVYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGII TEIIPVFARKPVFGYTTLVYATLSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETP MLFCVGFLLTFLLGGLTGVMLASPPLDFHVTDTYFVVAHFHYVLFGTIVFATFAGVYFWFPKMTGRLLDERLGKLHFWLT FIGFHTTFLVQHWLGDLGMPRRYADYLPSDGFQPYNVASTVGAFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLE WATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHVGRAHGPADKDVTRLDDVQVRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 0.0 | 76 |
