Gene Information

Name : serB (MAV_3907)
Accession : YP_883069.1
Strain : Mycobacterium avium 104
Genome accession: NC_008595
Putative virulence/resistance : Unknown
Product : phosphoserine phosphatase SerB
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0560
EC number : 3.1.3.3
Position : 4035849 - 4037084 bp
Length : 1236 bp
Strand : -
Note : identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488

DNA sequence :
GTGAACTCACCACCCAAGGTGTCGGTGCTGATCACCGTCACCGGCGTGGACCAGCCGGGCGTGACGGCGACCCTGTTCGA
GGTGCTGTCGGGGCACGGGGTCGAGCTGCTCAACGTCGAACAGGTGGTGATCCGGCACCGGCTGACGCTGGGGGTGCTGG
TGTGCTGCCCCGCCGACGTCGCCGACGGGCCCGCGCTGCGCCACGACGTGGAGGCGGCCATCCGCAAGGTCGGCCTGGAC
GTCAGTATCGAACGCAGCGACGACGTGCCGATCATCCGGGAGCCCTCGACGCACACCATCTTCGTGCTGGGCCGGCCCAT
CACCGCGGCCGCGTTCGGCGCGGTGGCCCGCGAGGTGGCCGCGCTGGGCGTCAACATCGACCTGATCCGCGGCGTGTCCG
ACTATCCGGTGATCGGGCTGGAGCTGCGGGTCTCGGTGCCGCCGGGGGCCGACGGGGCGCTGCGCACCGCGCTGAACCGG
GTGTCCAGTGAGGAGCACGTCGACGTCGCCGTCGAGGACTACACCCTGGAACGGCGGGCCAAGCGGCTCATCGTGTTCGA
CGTGGACTCGACGCTGGTGCAGGGTGAGGTCATCGAGATGCTGGCGGCCAAGGCGGGCGCCGAGGGCCAGGTCGCCGCGA
TCACCGACGCCGCGATGCGCGGCGAGCTGGACTTCGCGCAGTCGCTGCAGCAGCGGGTGGCCACGCTCGCCGGCCTGCCC
GCCACGGTGATCGACGAGGTGGCCGGCCAGCTGGAGCTGATGCCCGGCGCCCGGACCACGCTGCGCACGCTGCGCCGCCT
GGGATATGCCTGCGGCGTGGTGTCGGGGGGCTTCCGCCGGATCATCGAGCCGCTGGCCGAGGAGCTGATGCTGGACTACG
TGGCGGCCAATGAGCTGGAGATCGTGGACGGCACACTCACCGGCCGGGTGGTCGGCCCGATCATCGATCGGGCCGGAAAG
GCCACGGCGCTAAGGGAATTCGCGCAGCGGGCCGGGGTGCCCATGGCGCAGACCGTCGCCGTGGGCGACGGCGCCAACGA
CATCGACATGCTGGCCGCGGCCGGGCTGGGCATCGCGTTCAACGCCAAGCCGGCGCTGCGCGAGGTAGCCGACGCGTCGC
TGAGCCACCCGTATCTGGACACGGTGCTGTTCCTGCTCGGGGTGACCCGCGGCGAGATCGAGGCCGCCGACGCGATCGAC
GGCGAGGTGCGCCGGGTGGAGATCCCGCCGGAGTAA

Protein sequence :
MNSPPKVSVLITVTGVDQPGVTATLFEVLSGHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLD
VSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVPPGADGALRTALNR
VSSEEHVDVAVEDYTLERRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLP
ATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGK
ATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAID
GEVRRVEIPPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1477 YP_001800871.1 hypothetical protein Not tested Not named Protein 6e-89 56