|
Name : MAV_3418 (MAV_3418) Accession : YP_882600.1 Strain : Mycobacterium avium 104 Genome accession: NC_008595 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3563131 - 3564738 bp Length : 1608 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGGGTCCACCGCTGCTCGACGTGTCCGGTCTGACCGTGACCTATCCCGGTGCGGTGCCCAGGGTGGCGCTGGACCGCGT CGACCTGGCGGTGTCGTCGGGCGAATTCGTCGCCGTGGTCGGTGAATCCGGTTCGGGCAAAACGACTTTGGCCAACGCGG TGGTCGGATTGCTGCCGGCGGCCGCGAGGATCACCGCGGGGTCGTTAACCATCGCCGGTCGCGACGTGCTGGGCCTGAGC GAACGGCAGTGGTGCCGGCTGCGCGGCAGCACCGTGGGATTGGTGCCGCAGGATCCCGCCACGTCGTTGAACCCGGTGCG CAGCATCGGATCCCAGATCGCCGAGATCTTCCCCCTGAAGGGCGAGCGGTTGTCCCGGCGCGAGGCGCGGCGGCGCTGCA TCGAGCTGCTGGACCGGGTGGAGATCGACCGCCCCGCGCAGCGCCTGAAACAGTATCCGGGCGAGCTCTCCGGCGGCATG CGCCAGCGCGTGCTCATCGCGATCGCGTTCGCCCTCAACCCCGGGCTGTTGATCGCCGACGAGCCGACGTCCGCCCTCGA CGTGACCGTCCAGCGGCACGTGCTGGCCGTGTTCGATCGGCTGGTCGCCGAGCAGCGCACCACCGTCGTCTTCATCACCC ACGACATCGGGGTGGCCACCGATCACGCGTCGCGCATCGTGGTGATGCGCGGCGGCGTCGTCGTCGAGGACGCGCCGGCC GAGGCCATCGTCGCGGCCCCGCGCACCGAGTACGCCGCGCATCTCGTCCGCCGGCTCACGGCTCCGGCGCCGGCCGCCGC GCCCGCCGGCTCCGAGGACGTCATCGAGGTCGCCGGCGTCGCCAAGGAGTTCCGGCTCGGTGCCCGGGCCCGGCACACCG CCGTGGCGGAGGTGGCCTTCACCGTCCGGCGGGGCGAGACGCTGGCGCTGGTGGGGGAGTCCGGGTCGGGCAAGTCGACG ACGGCGAAAATGGTCGTCGGCCTGCTCACCCCCACCCGGGGCACGGTGCGGGTGCTGGGCCGCGATGTCGCCGCGCTGCC GGCGCGGGCCCGGCGCCGGCACTGGCAAGACATCCAGTTCGTCTACCAGAACCCGGGGTCGGCGCTGGACCCGCGCTGGA CGGTGCGCCAGATCCTGGACGGCCCGCTGCGGTCCTACCGGGTGGACGACCGGGCCCGCCGCGCGCAGCGCATCGCCGAG GCCCTGGCCAGTGTCGGCTTGAGTGACGACAAGCTGGACCGGCGGCCGGGCGAGCTCTCCGGCGGTGAATGCCAGCGGGT CGCGATCGCCCGCGCCCTGGTGCTGCGCCCGCAGATCGTGGTGCTCGACGAACCGCTGTCCGCGCTCGACGTCGTCACCC AGGACCAGATCGTCGGCCTGCTGCTGCGGCTGCAGCGGCAGCTGGGGCTGACCTATCTGTTCGTCTCGCACGATCTGTCG GTGGTGCGGCGACTGGCGCACCGCGTCGTGGTGCTGCGCGCCGGGCGCGTCGTGGAAACCGGGGACACCGCGGCGGTGTT CGCCGCGCCGGCCGCGGACTACACCCGCGCGCTGCTCGACGCGGTCCCGGGCCGGCGGCTGGCGCATCCGGCGCTGTCCC CCTCCTGA Protein sequence : MGPPLLDVSGLTVTYPGAVPRVALDRVDLAVSSGEFVAVVGESGSGKTTLANAVVGLLPAAARITAGSLTIAGRDVLGLS ERQWCRLRGSTVGLVPQDPATSLNPVRSIGSQIAEIFPLKGERLSRREARRRCIELLDRVEIDRPAQRLKQYPGELSGGM RQRVLIAIAFALNPGLLIADEPTSALDVTVQRHVLAVFDRLVAEQRTTVVFITHDIGVATDHASRIVVMRGGVVVEDAPA EAIVAAPRTEYAAHLVRRLTAPAPAAAPAGSEDVIEVAGVAKEFRLGARARHTAVAEVAFTVRRGETLALVGESGSGKST TAKMVVGLLTPTRGTVRVLGRDVAALPARARRRHWQDIQFVYQNPGSALDPRWTVRQILDGPLRSYRVDDRARRAQRIAE ALASVGLSDDKLDRRPGELSGGECQRVAIARALVLRPQIVVLDEPLSALDVVTQDQIVGLLLRLQRQLGLTYLFVSHDLS VVRRLAHRVVVLRAGRVVETGDTAAVFAAPAADYTRALLDAVPGRRLAHPALSPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-84 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-62 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-62 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-62 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-62 | 41 |
