|
Name : MAV_0318 (MAV_0318) Accession : YP_879606.1 Strain : Mycobacterium avium 104 Genome accession: NC_008595 Putative virulence/resistance : Unknown Product : amino acid ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 311084 - 312178 bp Length : 1095 bp Strand : + Note : identified by match to protein family HMM PF00005 DNA sequence : GTGATCGTCTTCGACAACGTCAGCAAGGTGTTCGCGGACGGGACCGCCGCCGTGGACCGGCTCAGCCTGACCGTGCCCAC CGGCAAGCTGACCGTCTTCGTCGGATCCTCCGGCAGCGGCAAGACCACCGCGCTGCGCATGATCAACCGGATGATCGAGC CGACGTCCGGCACCATCAGCATCGACGGTGTCGACGTGTCCACCCTCGACCCGGTCAAACTGCGCCTGGGCATCGGCTAC GTCATCCAGCATGCCGGGCTGATGCCGCACCAGCGGGTGATCGACAACGTGGCAACGGTTCCCGTGCTGCGCGGCCAGCG CCGGCGGGCCGCCCGCACGGCGGCCTACCAAGTGCTCGAGCGCGTCGGGCTGGACGTCAAGCTGGCCCGGCGCTATCCCG CCCAGCTCTCCGGCGGGGAACAACAACGGGTCGGCGTGGCTCGCGCGCTGGCCGCCGACCCGCCGATCCTGCTGATGGAC GAGCCGTTCTCCGCCGTCGATCCGGTGGTGCGTCACGACCTGCAAAACGAAATACTGCGGCTGCAAAGCGAATTGCACAA AACCATCGTGTTCGTCACGCACGACATCGACGAGGCGCTGCGGCTCGGCGAACGGGTCGCGGTGTTCAAGGGCGGCATGT TGCAGCAGTGTGACGAGCCCGCCCGGCTGCTGTCCCGCCCGGCAAACGACTTCGTGTCGAGGTTCATCGGCCTGGGCCGT GGCTACCGATGGCTGCAACTCATCGACGCCGCCGGACTGCCGGTGCACGACGTCCGCCGCCTGTTCGCCGAAAACCTGTC GGGTGCAGATGTTTTCGACGGTTGGGCCGTCGTGGTCGACGAGGCCGGGGCGCCGCTGGGCTGGATCGACGCCGAGGGCC TGCGCCGACACCGCGACGGCCTGGCGCTGTCCGACAGCATGACCGGCGTCGGATCGCTGTTTCGGCCGCGGGGCAACCTG AGCCAGGCGCTGGACGCCGCGCTGTCGTCGCCGTCGGGAATCGGTGTCGCCGTCGACGACGACGGCAGGGTGATCGGCGG TGTGCTGGCCGCCGACGTGCTGGCCGCGGTGGAATCGCAGCGAAAGAGCCGCTGA Protein sequence : MIVFDNVSKVFADGTAAVDRLSLTVPTGKLTVFVGSSGSGKTTALRMINRMIEPTSGTISIDGVDVSTLDPVKLRLGIGY VIQHAGLMPHQRVIDNVATVPVLRGQRRRAARTAAYQVLERVGLDVKLARRYPAQLSGGEQQRVGVARALAADPPILLMD EPFSAVDPVVRHDLQNEILRLQSELHKTIVFVTHDIDEALRLGERVAVFKGGMLQQCDEPARLLSRPANDFVSRFIGLGR GYRWLQLIDAAGLPVHDVRRLFAENLSGADVFDGWAVVVDEAGAPLGWIDAEGLRRHRDGLALSDSMTGVGSLFRPRGNL SQALDAALSSPSGIGVAVDDDGRVIGGVLAADVLAAVESQRKSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-60 | 56 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-60 | 56 |
