|
Name : glnA (MAV_2267) Accession : YP_881471.1 Strain : Mycobacterium avium 104 Genome accession: NC_008595 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 2271617 - 2273053 bp Length : 1437 bp Strand : - Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : GTGACGGAAACGACGCCCGACGACGTCTTCAAACTCGCCAAGGACGAGAAAGTCGAATTTGTCGACGTCCGGTTCTGTGA CCTACCCGGCATCATGCAGCACTTCACAATCCCGGTTTCGTTTTTCGACGAGAGCGTCTTCGAGGACGGCCTGGCCTTCG ACGGCTCGTCCATTCGCGGATTCCAGTCCATTCACGAATCCGACATGTTGCTCCTGCCGGACCCGGCCACGGCCCAGATC GACCTGTTCCGCGAGGCCAAGACGCTGAACCTGAACTTCTTCGTGCACGACCCGTTCACCCTCGAGCCGTACTCGCGCGA CCCGCGCAACATCGCCCGCAAGGCGGAGAACTACCTGATCTCCACCGGTGTGGCCGACACCGCGTACTTCGGCGCCGAGG CCGAGTTCTACATCTTCGACTCGGTGAGCTTCGACTCGCGCACCAACGGCTCGTTCTACGAGATCGACGCCATCTCGGGC TGGTGGAACACCGGCTCGCCCAACGAGCTCGACGGCAGCCCCAACCGCGGCTACAAGGTCCGCCCCAAGGGGGGCTACTT CCCCGTCGCCCCCGTCGACCACTACGTCGACCTGCGCGACCAGATGCTGTCCAACCTGATCAAGGCCGGCTTCAGCCTGG AGAAGGGCCACCACGAGGTGGGCACCGGCGGCCAGGCCGAGATCAACTACAAGTTCAACACGCTGCTGCACGCCGCCGAC GACATGATGCTCTACAAGTACATCGTCAAGAACACCGCGTGGCAGAACGGCAAGACCGTCACGTTCATGCCCAAGCCGCT GTTCGGGGACAACGGCTCCGGCATGCACACCCATCAGTCGCTGTGGAAGGACGGCAGCCCGCTGATGTACGACGAGACGG GCTACGCCGGTCTGTCGGACACCGCGCGGCACTACATCGGCGGCCTGCTACACCACGCGCCGTCGCTGCTGGCGTTCACC AACCCGACGACGAACTCCTACAAGCGCCTGGTGCCGGGCTTCGAGGCGCCGATCAACCTGGTCTACAGCCAGCGCAACCG CTCGGCGTGTGTGCGCATCCCGATCACCGGCACCAACCCGAAGGCCAAGCGGCTCGAGTTCCGTTGCCCCGACTCCTCGG GCAACCCGTACCTGGCGTTCTCGGCCATGCTGATGGCCGGCCTGGACGGCATCAAGAACAAGATCGAGCCGCAGGCGCCG GTCGACAAGGACCTCTACGAGCTGCCGCCCGAGGAGGCCGCCAACATCCCGCAGGCGCCGACCCAGCTGTCCGCGGTGAT CGACCGGCTGGAAGAGGACCACGAATACCTCACCGAGGGAGGCGTTTTCACGCCCGACCTGATCGAGACGTGGATCAGCT TCAAGCGCGAGACCGAGATCCTGCCGGTCCAGGTCCGGCCGCACCCCTATGAATTCGCGCTGTACTACGACGTGTAG Protein sequence : MTETTPDDVFKLAKDEKVEFVDVRFCDLPGIMQHFTIPVSFFDESVFEDGLAFDGSSIRGFQSIHESDMLLLPDPATAQI DLFREAKTLNLNFFVHDPFTLEPYSRDPRNIARKAENYLISTGVADTAYFGAEAEFYIFDSVSFDSRTNGSFYEIDAISG WWNTGSPNELDGSPNRGYKVRPKGGYFPVAPVDHYVDLRDQMLSNLIKAGFSLEKGHHEVGTGGQAEINYKFNTLLHAAD DMMLYKYIVKNTAWQNGKTVTFMPKPLFGDNGSGMHTHQSLWKDGSPLMYDETGYAGLSDTARHYIGGLLHHAPSLLAFT NPTTNSYKRLVPGFEAPINLVYSQRNRSACVRIPITGTNPKAKRLEFRCPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAP VDKDLYELPPEEAANIPQAPTQLSAVIDRLEEDHEYLTEGGVFTPDLIETWISFKRETEILPVQVRPHPYEFALYYDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 4e-89 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_881471.1 | glutamine synthetase, type I | VFG1399 | Protein | 0.0 | 91 |
