Gene Information

Name : MAV_1022 (MAV_1022)
Accession : YP_880280.1
Strain : Mycobacterium avium 104
Genome accession: NC_008595
Putative virulence/resistance : Virulence
Product : PrrA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 958145 - 958846 bp
Length : 702 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGGACACAGCAGCTAGCTCACCGCGGGTCTTGGTCGTCGACGACGACTCCGATGTGCTCGCGTCGCTGGAACGTGGCCT
GCGACTGTCCGGATTCGAGGTGTCCACCGCGGTCGACGGCGCCGAGGCGCTGCGCAGCGCCACCGAGACACGCCCGGACG
CGATCGTGCTCGACATCAACATGCCGGTGCTGGACGGCGTCAGCGTCGTCACCGCGCTGCGCGCCATGGACAACGACGTC
CCCGTCTGCGTGCTGTCGGCCCGCAGCTCGGTCGACGACCGGGTGGCGGGCCTGGAGGCCGGGGCCGACGACTACCTGGT
CAAGCCGTTCGTGCTGGCCGAGCTGGTCGCGCGGGTCAAGGCGCTGCTGCGCCGCCGCGGCGCCACCGCCACCTCCTCGT
CGGAAACGATCACGGTGGGTCCGCTGGAGGTCGACATCCCCGGCCGCCGCGCCCGGGTCAACGGCGTGGACGTCGATTTG
ACCAAGCGGGAGTTCGACCTGCTGGCGGTCCTGGCCGAGCACAAGACCGCCGTGCTGTCCCGCGCACAGCTACTGGAGCT
GGTGTGGGGCTATGACTTCGCCGCCGACACCAACGTCGTCGACGTGTTCATCGGATACCTGCGCCGCAAGCTCGAGGCCA
ACGGCGGACCCCGGCTGCTGCACACCGTCCGCGGAGTGGGATTCGTGCTGCGCATGCAGTAA

Protein sequence :
MDTAASSPRVLVVDDDSDVLASLERGLRLSGFEVSTAVDGAEALRSATETRPDAIVLDINMPVLDGVSVVTALRAMDNDV
PVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGATATSSSETITVGPLEVDIPGRRARVNGVDVDL
TKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEANGGPRLLHTVRGVGFVLRMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-25 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0083 Protein 1e-30 45
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0125 Protein 5e-30 44
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0197 Protein 2e-24 44
MAV_1022 YP_880280.1 PrrA family transcriptional regulator AE000516.2.gene3505. Protein 5e-29 44
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0638 Protein 8e-24 43
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_012469.1.7685629. Protein 5e-27 43
MAV_1022 YP_880280.1 PrrA family transcriptional regulator HE999704.1.gene1528. Protein 1e-30 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_002952.2859905.p0 Protein 5e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_002745.1124361.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_009782.5559369.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_002951.3237708.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_003923.1003749.p0 Protein 7e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_002758.1121668.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_007622.3794472.p0 Protein 5e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_009641.5332272.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_013450.8614421.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_007793.3914279.p0 Protein 8e-27 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator HE999704.1.gene2815. Protein 2e-26 42
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0308 Protein 1e-27 41
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0347 Protein 9e-24 41
MAV_1022 YP_880280.1 PrrA family transcriptional regulator BAC0111 Protein 9e-26 41
MAV_1022 YP_880280.1 PrrA family transcriptional regulator NC_012469.1.7686381. Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MAV_1022 YP_880280.1 PrrA family transcriptional regulator VFG1389 Protein 3e-82 99
MAV_1022 YP_880280.1 PrrA family transcriptional regulator VFG1390 Protein 3e-41 50
MAV_1022 YP_880280.1 PrrA family transcriptional regulator VFG1386 Protein 3e-36 46
MAV_1022 YP_880280.1 PrrA family transcriptional regulator VFG0596 Protein 1e-25 42