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Name : nifJ (NT01CX_1854) Accession : YP_877927.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Virulence Product : pyruvate:ferredoxin (flavodoxin) oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : - Position : 1063225 - 1066731 bp Length : 3507 bp Strand : + Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM PF02775; match to protein family HMM TIGR02176 DNA sequence : ATGGCAAAAATGAAAACAATGGATGGTAATACTGCTGCTGCATATACATCATATGCCTTTACTGATGTTACAGCAATATA TCCAATCACACCTTCATCTCCAATGGCTGAAAGCGTTGATGAATGGAGCGCACAAGGAAAGAAAAACTTATTTGGTCAAA CTGTAAAAGTTATGGAATTACAATCTGAAGCTGGTGCATCAGCAGCAGTTCATGGTTCACTTCAAAGTGGAGCATTAACT ACTACTTACACTGCATCTCAAGGATTACTATTAATGATTCCTAACATGTACAAAATTGCTGGTGAATTATTACCATCAGT ATTCCATGTAAGTGCTAGAGCTTTAGCATCACATGCATTATCAATCTTTGGTGATCACCAAGATGTAATGGCTGCAAGAC AAACTGGATTCGCATTACTTGCTTCAAATAGTGTACAAGAATCTATGGATTTAGCAGCTGTAGCTCACCTTGCAGCATTA AAAGGAAGAGTACCATTCGTACATTTCTTTGATGGATTCAGAACTTCTCACGAAATTCAAAAAGTTGAATTATTAGACTA TGAAGATTTAAGAGGATTAATAGATCAAGATGCTCTTAAAGCATTCAGAAACAATGCTTTAAGCCCAGAACATCCTGTAA CTAGAGGAACAGCTCAAAACCCTGATATATTCTTCCAAGCTAGAGAAGCTTCTAACAAATACTACAATGCAATCCCTGGT ATCGTAGAAGAATACATGGGAGAAATCAACAAAATAACAGGAAGAGATTACAAGCTATTCAACTACTATGGTGCTGAAGA TGCTGATAGAGTAATCGTTGCTATGGGTTCAGGTTGTGAAACTATAGAAGAAGTTGTAGATTACTTAAGTGCTAGAGGAG AAAAAGTAGGTTTAGTAAAAGTTCACTTATACAGACCATTCTCTAAAGAACATTTAATAAATGCAGTACCAAAGACAGTT AAGAAAATAGCTGTTTTAGATAGAACAAAAGAACCAGGTGCACTTGGTGAACCATTATACTTAGATGTTAAATCTGCATT CTATGATGTAGAAAACAAACCAGTAATCGTTGGTGGTAGATATGGATTAGGTTCAAAAGATACAACTCCAGGACAAATGG CTGCTGTATTTGAAAACCTAAAACAAGATGAGCCAAAAAATAACTTCACATTAGGAATTAATGATGACGTTACTCATACA TCACTTGAAACAGTTGAAGGAATAGACGTAGTTGCTGAAGGAACTACTGCATGTAAATTCTGGGGACTTGGATCAGACGG TACTGTTGGTGCTAACAAGAGCGCTATCAAAATCATCGGAGACCATACAGACATGTATGCTCAAGGATATTTTGCATATG ACTCTAAAAAATCTGGTGGTATAACAATTTCTCACTTAAGATTTGGTAAATCACCAATTAAATCACCTTACTTAATCCAA ACTCCACACTTTGTTGCATGTCATAACCAATCATATGTTAACAAATATGATGTATTAGAAGGATTAAGAGATAACGGAAA CTTCTTACTTAACTGTATCTGGAACCAAGAAGAAGTTGAAGAACACTTACCAGCTCATATGAAGAGATATATTGCTAACC ACAATATCAACTTCTACACAATTGATGCTGTTAAAATAGCTCAAGAAATCGGACTAGGCGGAAGAATCAACATGATCATG CAAGCTGCATTCTTCAAACTAGCTAACATCATTCCTATAGAAGACGCTGTTAAATACTTAAAAGACGCAGTTGTAACTTC TTACGGTAAAAAAGGTGAAAAAGTTGTTAACATGAACCACGCTGCAATAGATCAAGGTGTAGGCGCTATCGTTAAAGTAG AAGTTCCTGAATCTTGGAAAACTGCAGAAGATAAGAAAGTTGAAGAAAAAGACGTTCCTGAGTTCATTTCAAAAATTCTT GAACCAATGAACAGACAAAAAGGTGATGAACTTCCAGTAAGTGCTTTCGAAGGCATGGAAGATGGTACATTCCCTAACGG AACTGCTGCATATGAAAAGAGAGGAATCGCAATTAGCGTACCTGAATGGAGCATGGAAAATTGTATCCAATGTAACCAAT GTTCATATGTTTGTCCTCACGCTGTAATCAGACCAACATTATTAACTGAGGAAGAATACAACAATAAACCAGAAGGATTC AAAGCTGTAGAAGCTAAAGGAATCAAAGGTGAAAAATTATACTATGCAATGAACGTTAGTGTTCTTGACTGTACTGGTTG CGGAAACTGTGCTGAAGTTTGTCCAGCTCCAACTAAAGCTTTAGTTATGAAACCAGCTGCAACTCAAGAAGCAGAACAAG CTAACTATGACTACGCTCAAACTTTATCTGTTAAAGAAAATCCAATGGATAAATACACAGTTAAAGGTAGCCAATTTGAA AAACCACTTCTTGAATTCCACGGTGCTTGTGGTGGATGTGGAGAAGCTGCATACGCTAAACTTATAACTCAATTATTTGG TGACAGAATGATGATAGCTAACGCTACAGGATGTACATCAATTTGGGGAGGATCAGCTCCTGCAACTCCATACACTAAAA ACCACGAAGGAAAAGGACCTGCTTGGGCTAACTCTTTATTCGAAGATAACGCTGAATATGGTCTTGGAATGGCTTTAGGT GTATCTACTATAAGAACAAACATGGAAAACGTAGCTAAAGAAGCTATGGAAGAAGTAAGTGCTGAATTAAAATCTGCATT ACAAGAATGGGTAGATAATAAAGAAGATGCTGAAGGATCTAAGAAAGCAGCAGCTAAATTATTACCATTATTAGAAGCAG AAAAATCAAATGCAAAAGTAGCTGAAATATTAGAAAACAAAGACTTCTTAATCAAGAGATCTCAATGGATCTTTGGTGGA GACGGTTGGGCATACGATATCGGATACGGTGGAGTTGACCACGCTCTAGCATCAGGAGAAGACATAAACATCTTCGTATT TGATACAGAAGTTTACTCAAATACAGGTGGACAATCTTCTAAATCAACTCGTACAGGTGCGGTTGCTAAATTCGCAGCAG CAGGTAAGAGAACTAAGAAGAAAGATCTTGGCTTAATGGCTATGACTTATGGATATGTTTACGTTGCTCAAATAGCTATG GGATCTGACAAGAACCAAACTATAAAAGCAATTAAAGAAGCAGAAGCTTATCCAGGTCCATCATTAATAATCGCTTATGC TCCATGTATCAACCACGGATTAAAAGTTGGAATGGCTTGCTCTCAATTAGAAGAGAAAAAAGCTGTTGATTGTGGATATT GGGGATTATACAGATATAACCCACAATTAAAAGAAGAAGGAAAGAACCCATTCATATTAGATTCTAAAGAACCTAAGGGT AACTTTAAAGACTTCTTATTAGGCGAAGTTAGATATGCATCATTAAAGAAAGCTCGTCCAGAACAAGCTGATGAGTTATA TGCTCAAACTGAAAAAGATGCTATGGAAAGACTTGAAACTTATAAGAGATTAGCTGAAGATAAATAA Protein sequence : MAKMKTMDGNTAAAYTSYAFTDVTAIYPITPSSPMAESVDEWSAQGKKNLFGQTVKVMELQSEAGASAAVHGSLQSGALT TTYTASQGLLLMIPNMYKIAGELLPSVFHVSARALASHALSIFGDHQDVMAARQTGFALLASNSVQESMDLAAVAHLAAL KGRVPFVHFFDGFRTSHEIQKVELLDYEDLRGLIDQDALKAFRNNALSPEHPVTRGTAQNPDIFFQAREASNKYYNAIPG IVEEYMGEINKITGRDYKLFNYYGAEDADRVIVAMGSGCETIEEVVDYLSARGEKVGLVKVHLYRPFSKEHLINAVPKTV KKIAVLDRTKEPGALGEPLYLDVKSAFYDVENKPVIVGGRYGLGSKDTTPGQMAAVFENLKQDEPKNNFTLGINDDVTHT SLETVEGIDVVAEGTTACKFWGLGSDGTVGANKSAIKIIGDHTDMYAQGYFAYDSKKSGGITISHLRFGKSPIKSPYLIQ TPHFVACHNQSYVNKYDVLEGLRDNGNFLLNCIWNQEEVEEHLPAHMKRYIANHNINFYTIDAVKIAQEIGLGGRINMIM QAAFFKLANIIPIEDAVKYLKDAVVTSYGKKGEKVVNMNHAAIDQGVGAIVKVEVPESWKTAEDKKVEEKDVPEFISKIL EPMNRQKGDELPVSAFEGMEDGTFPNGTAAYEKRGIAISVPEWSMENCIQCNQCSYVCPHAVIRPTLLTEEEYNNKPEGF KAVEAKGIKGEKLYYAMNVSVLDCTGCGNCAEVCPAPTKALVMKPAATQEAEQANYDYAQTLSVKENPMDKYTVKGSQFE KPLLEFHGACGGCGEAAYAKLITQLFGDRMMIANATGCTSIWGGSAPATPYTKNHEGKGPAWANSLFEDNAEYGLGMALG VSTIRTNMENVAKEAMEEVSAELKSALQEWVDNKEDAEGSKKAAAKLLPLLEAEKSNAKVAEILENKDFLIKRSQWIFGG DGWAYDIGYGGVDHALASGEDINIFVFDTEVYSNTGGQSSKSTRTGAVAKFAAAGKRTKKKDLGLMAMTYGYVYVAQIAM GSDKNQTIKAIKEAEAYPGPSLIIAYAPCINHGLKVGMACSQLEEKKAVDCGYWGLYRYNPQLKEEGKNPFILDSKEPKG NFKDFLLGEVRYASLKKARPEQADELYAQTEKDAMERLETYKRLAEDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 61 |
