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Name : NT01CX_1779 (NT01CX_1779) Accession : YP_877852.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 984895 - 986733 bp Length : 1839 bp Strand : + Note : identified by match to protein family HMM PF02719 DNA sequence : TTGAAAAGTAATAAGAAATTCTTAGTATATGATATCGTTCTTGTAACATTTTTCTTATATTTTGCACTGCTACTAAGATT TGATTTTCATATACCTCAAGAATACATAGTATTTTTTAAATTATCAATAGTTCCGGTTATTGTTATTAGTGTAATTTGTA ATGCGATATTTCATTTATATGATCGCATATGGAAATATGCGTCTATTGATGAGTTAATATCAATAGTATATTCAGTATCG CTTTCAAACATAATATTTATTTTTTATAGTTATTTTATAAGTTATAAATTATTAAGTTTTGTACACTATAGATTTCCTGC CACAGTACACATAATATTTTGGGTACTATCTGTATTAGCTCTAGGAGGAACTAGATTTATATATAGAGTAGTTGGTGGAA ATGACAACGCTGAAACTTTTGATAATAAGTCTTCAAATATATTAATAGTTGGAGCTGGAGATGCTGGAGCAATGTTGATA AAAGAGATTAAAAAGCATCATTCTTTAAATTATAATATAGTAGGACTTATAGATGATGATTTATCAAAAATTGGTCAAGT AATCAATGGGATAAAGATACTAGGCACTAGAGATGAAATAATAAAGATATGTAATAATTATGGGGTAGAAGAAATATTTA TTGCTCTTCCATCTGCACCTTTAAAAGAAAGAAAGGAAATTTACAATTCTTGCAAAGAAACTGGGTGTAAATTAAAAACA CTTCCAGGTATATATGAAATAATAAATGGAAATGTAAATATAAGTCAACTTAGAGATGTAGACATTAATGATTTGTTAGG TAGAGATCCAGTCAAATTAAATAATGAAAATATAAATGAGTATATAAATGATAAAGTTGTTTTAGTTACAGGTGGGGGAG GCTCCATAGGATCTGAACTTTGTAGACAAATAGTAAAATTTAACCCTAAAAAGTTAATAATATTAGATATATACGAAAAT AATGCATATGATCTTCAAATGGAATTAAAATATAAGTATCCGAACTTAGATATGGAAGTTGTAATTGCATCTATTAGAGA TATGACAAGATTAAAGGAAGTATTTGAAACATACAGACCATATGTAGTATTTCATGCTGCAGCACATAAACATGTTCCAC TTATGGAGGCAAATCCAAGGGAAGCTATTAAAAACAATATATTTGGAACTTACAACTTAGCAAAATGTAGTGACATGTAT AATGTAAAAAGATTTGTTCAAATAAGTACGGATAAAGCTGTTAATCCTACTAATGTTATGGGTGCAACTAAAAGATTCTG TGAAAAAATAATTCAAGCTTTCGATAATGAAAGTAAAACAGAATATGTAGCTGTAAGATTTGGAAATGTTCTTGGAAGTA ATGGTTCAGTAATACCACTATTTAAGAAACAAATAAAAGAAGGTGGTCCTGTAACAGTTACCCATCCTGAAATAAATAGA TTCTTTATGACAATACCAGAAGCAGCTCAACTTGTAATTCAAGCAGGAGCTATGGCAAAGGGTGGGGAAATATTTGTACT TGATATGGGTGAACCTGTTAAAATAGTAGATTTAGCTAAGGACTTAATTACTCTATCTGGATTAAAACCAGATGAAGATA TAAAAATTGAGTATACAGGATTAAGACCTGGTGAAAAACTATATGAAGAATTACTAATGGATGAAGTAGCATTAACATCT ACAGGTCATGAAAAAATATTTATTGAAAAGCCTAAGGAATTCAACAGAGAATATATAGAAAAATCTATAGAAGATTTTAA AGGTGTTGTAGAAGGGAAAAGAGAGGAAATAATTGATGTTCTTCAAGAAAAAGTCCCAACATATAAACCTAAAGAATAA Protein sequence : MKSNKKFLVYDIVLVTFFLYFALLLRFDFHIPQEYIVFFKLSIVPVIVISVICNAIFHLYDRIWKYASIDELISIVYSVS LSNIIFIFYSYFISYKLLSFVHYRFPATVHIIFWVLSVLALGGTRFIYRVVGGNDNAETFDNKSSNILIVGAGDAGAMLI KEIKKHHSLNYNIVGLIDDDLSKIGQVINGIKILGTRDEIIKICNNYGVEEIFIALPSAPLKERKEIYNSCKETGCKLKT LPGIYEIINGNVNISQLRDVDINDLLGRDPVKLNNENINEYINDKVVLVTGGGGSIGSELCRQIVKFNPKKLIILDIYEN NAYDLQMELKYKYPNLDMEVVIASIRDMTRLKEVFETYRPYVVFHAAAHKHVPLMEANPREAIKNNIFGTYNLAKCSDMY NVKRFVQISTDKAVNPTNVMGATKRFCEKIIQAFDNESKTEYVAVRFGNVLGSNGSVIPLFKKQIKEGGPVTVTHPEINR FFMTIPEAAQLVIQAGAMAKGGEIFVLDMGEPVKIVDLAKDLITLSGLKPDEDIKIEYTGLRPGEKLYEELLMDEVALTS TGHEKIFIEKPKEFNREYIEKSIEDFKGVVEGKREEIIDVLQEKVPTYKPKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 5e-105 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-105 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT01CX_1779 | YP_877852.1 | polysaccharide biosynthesis family protein | VFG1300 | Protein | 5e-108 | 47 |
