Gene Information

Name : NT01CX_1561 (NT01CX_1561)
Accession : YP_877642.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Unknown
Product : single-strand binding protein family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 753656 - 753997 bp
Length : 342 bp
Strand : +
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGAACAAGGTAATTATTATGGGAAGAACTACAAAGGACATAGAATTAAGACAACTTAAAGAGAATAATAAATATGTTTG
CAATTTTAGATTAGCAGTGGATAGAGGATTTATAGACAAAAATGGCGAAAAAGTCGTTGATTTTATACCAGTAGTTGCCT
GGGAGAAAAACGCAGAAATATTATCAAAATATACTGCTAAGGGAAGCCGTGTTAATATCATAGGAAGACTTCAAATAAAA
AGCTATGAAACTAAAAATGGAGATAGAAGATTTATGAGTGAAGTTGTGGCTCAAGAGATACATATTTTAGATTGGAATAA
TTCATCAAAAGATGTTGGTTAA

Protein sequence :
MNKVIIMGRTTKDIELRQLKENNKYVCNFRLAVDRGFIDKNGEKVVDFIPVVAWEKNAEILSKYTAKGSRVNIIGRLQIK
SYETKNGDRRFMSEVVAQEIHILDWNNSSKDVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 2e-18 45
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-18 44
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-18 44
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-15 42
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 5e-16 42
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-17 42
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-19 41