Gene Information

Name : NT01CX_1520 (NT01CX_1520)
Accession : YP_877601.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 701739 - 702416 bp
Length : 678 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGCTAACATAATAGAACTTAAAAATATAAATAAAACATATGGAAAAAGAGTAAAAACTAAAGTGCTAAAGAATATTAA
CCTATCAATAGAAGAAGGATCATTTAACTCAATTATAGGGGCCTCTGGTAGTGGAAAAACTACACTTTTAAATCTAATAG
GAACTTTAGACAAGCCATCTAGTGGAGAAATATATATAGATGGAAAAATTATTAATAAGGTAGGTAGAAGAACTTTATCT
AAAATGAGAAATGAAACCATAGGATTTGTATTTCAATTTCATTATCTTCTTCCAGAGTTTAATGTAATAGAAAATGTATT
AATGCCAGGTAGAATTAAAAGCTTTTTTATAGGAAAGAAAAAAAGGCAAAGAGCAGAAAGTCTTTTAGAAATGGTAGGAC
TATTAGAACTAAAAAAGAAAAAAGTGTATGACCTATCAGGAGGGCAACAACAAAGAGTAGCAATTGCAAGGGCATTAATG
AATAATCCAAAAATAATTTTAGCAGATGAACCAACAGGAAACCTAGATTCAAAATCATCACAAGAAATTTACAATTTATT
TAGAAAAATAAACAAAGAATTCAATACTACTTTTGTAATAATTACTCATGATGAGAGAATAGCAGAAAAAACAGATAAAA
TTATAAAAATACAAGATGGAACAATAAAATTTTTGTGA

Protein sequence : 
MANIIELKNINKTYGKRVKTKVLKNINLSIEEGSFNSIIGASGSGKTTLLNLIGTLDKPSSGEIYIDGKIINKVGRRTLS
KMRNETIGFVFQFHYLLPEFNVIENVLMPGRIKSFFIGKKKRQRAESLLEMVGLLELKKKKVYDLSGGQQQRVAIARALM
NNPKIILADEPTGNLDSKSSQEIYNLFRKINKEFNTTFVIITHDERIAEKTDKIIKIQDGTIKFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01CX_1520 YP_877601.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-39 48
NT01CX_1520 YP_877601.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-38 44
NT01CX_1520 YP_877601.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-38 43