Gene Information

Name : NT01CX_1500 (NT01CX_1500)
Accession : YP_877581.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Unknown
Product : nucleoside permease
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 673239 - 674453 bp
Length : 1215 bp
Strand : +
Note : identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670

DNA sequence :
ATGAACAGATTCGTAGGATTACTAGGAGTAGCAGTAATACTATTGATAGCATATTTATTATCCAATGATAAGAAGAAAAT
TGATTGGAAATTAGTAGCTATCAGTATAGGATTACAGGTTGTATTTGCATTATTAATTTTAAAGTTCCCTCCAGGAAGAA
TGGCATTTGAATTTGTTGGAAATTTAATTAATAAATTATTAGACTTTACAAAAGAAGGATCTATATTCTTATTTGGTGAT
TTAGCTAATTCACAAAAATTTGGAGTAATATTCTCGTTCCAAATATTACCTACAATAGTATTCTTCTCAGCTTTTATGAG
CATTTTATATCACTTAGGAATAATGCAAGCTATAATTTCAGTATTAGCTAAAGGTATAGCAAAATTATTAGGAACAAGTG
GAGCAGAAACTCTATCAGCTGTAGGTAACATATTTTTAGGACAAACAGAAGCACCATTATTAATAAAACCTTTCATAAAA
GGTATGACAAAGTCAGAAATAATGACTATCATGGTAGGAGGAATGGCTACAGTTGCTGGAGGAGTAATGGCAGGATATGT
AGCTATGGGAATTAACGCTTCTTACTTACTTGCAGCAAGTATAATGGCTGCACCAGGTGGACTTATGATTTCAAAAATTT
TATATCCTCAAACTGAAAAAACTGAAACAGGTGGAGATGTAAAAATTGATATCGAAGTTCAAAGCTCAAACGTTGTAGAT
GCAGCTTCAACTGGAGCTAGTGAAGGATTATCTCTTGCATTAAATGTTGGAGCAATGTTACTTGCATTTATAGCATTAGT
TGCATTAGTTAACGCTATAATAGCTTTCTTTGGTGGATTATTCGGAATGCCACAATTAAGTCTTGGATGGATTCTTGGAA
GAGTATTCTCACCATTAGCATTTGTAATGGGTATACCAACTCAAGACATATTAACTGCAGGAAACTTATTTGGAACTAAG
GTTGTGTTAAACGAATTCGTAGCTTATGCTGAATTTGCAAAAATCATGAATACACTTAATCCAAAAACTGTAATGATATT
AACTTATGCACTTTGCGGATTTGCAAACATAAGTTCAATAGGTATTCAAATCGGAGGTATCGGTGGTCTTGCTCCAGAAA
AACGTAAAGATATAGCTAGTCTAGGAGTAAAAGCATTAGTTGGTGGACTTTTAACTACTTGTTTAACCGGTACTATTGCA
GGAATACTAATGTAA

Protein sequence :
MNRFVGLLGVAVILLIAYLLSNDKKKIDWKLVAISIGLQVVFALLILKFPPGRMAFEFVGNLINKLLDFTKEGSIFLFGD
LANSQKFGVIFSFQILPTIVFFSAFMSILYHLGIMQAIISVLAKGIAKLLGTSGAETLSAVGNIFLGQTEAPLLIKPFIK
GMTKSEIMTIMVGGMATVAGGVMAGYVAMGINASYLLAASIMAAPGGLMISKILYPQTEKTETGGDVKIDIEVQSSNVVD
AASTGASEGLSLALNVGAMLLAFIALVALVNAIIAFFGGLFGMPQLSLGWILGRVFSPLAFVMGIPTQDILTAGNLFGTK
VVLNEFVAYAEFAKIMNTLNPKTVMILTYALCGFANISSIGIQIGGIGGLAPEKRKDIASLGVKALVGGLLTTCLTGTIA
GILM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 2e-54 44