|
Name : NT01CX_1499 (NT01CX_1499) Accession : YP_877580.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 671741 - 673066 bp Length : 1326 bp Strand : + Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885 DNA sequence : ATGAGAATGTATGATCTTATTATGAAAAAAAGAGATGGCGGAGAACTTACAACAGAAGAAATTAAGTTCTTTGTCGATGG ATTTACAAAAGGTGAAATTCCAGATTATCAAGTATCAGCTATGATGATGGCTATATACTTTCAAAAAATGAATAAAAGAG AAACAGCTGATTTAACAAGAGCTATGTTTGAAAGCGGAGAAGTAATTGACCTTTCAGCTATAAACGGAATAAAAGTAGAT AAACATAGTACTGGTGGAGTTGGAGATACAACTACAATAGTTCTTGCACCACTTGTTGCAGCAGTTGGTGTTCCAGTTGC CAAAATGTCAGGTAGAGGACTAGGCCACACTGGCGGAACTTTAGATAAGTTAGAATCCTTCCCAGGACTATCAGTAGAAA TGCCTATTGAAAAGTTTATAAACAACGTAAATAAGTTAAAAATAGCTGTTGCAGGTCAAACAGCAAATCTTGCACCAGCA GATAAAAAATTATATGCACTTCGTGATGTTACTGCAACTGTTGACAACATGTCATTAATAGCATCAAGTATCATGAGTAA AAAGATAGCATCTGGAGCAGACGCTATAGTCCTTGATGTAAAAACAGGTAGTGGAGCATTTATGAAAACTGAAGAAAATT CATTTGCACTTGCACAAGAAATGGTTGACATTGGAAACCATGTTGGAAGAAACACAATAGGTGTTATAACTGATATGGAT CAACCACTTGGATATGCAGTAGGAAATGCTTTAGAAATTAAAGAAGCAATTGATACATTAAAAGGAGAAGGTCCAGAGGA TCTTACAGAACTTTGCTTAACTTTAGGTTCTCACATGGTGGTTTTAGGCGGAAAAGCTAAAGATGCTAAAGAAGCTAGAG CTATGCTTGAAGAAGTAATCAAAAATGGCAAAGGTATCGAAAAATTAAAAGAATTTGTTGCAGCACAAGGTGGAAATCCT AATTCTGTTGATGACACATCATTATTACCATCTGCAAGCATAGTAGAACCAGTACTTGCTACAGAAGATGGATATGTAAA AGCAATAAAAGCTGATGATGTTGGAATAGCAGCACTTGTTCTTGGAGCTGGTCGTGAAACTAAAGAAAGTGAAATTGATT TAGGTGTTGGATTAGTTCTTCACAAGAAAATAGGTGATTTCGTTAAAAAAGGCGAAGCTATCGCAACTATTTACGCAAAT GATGAAGGTAAGCAAAAAGAATCAGAAAAAAGATTACGTGCAGCATACACTTTTGTTGGTGAAAAAGTAGAAACTAAAAA GCTAATAAGAGGAATTGTTACAAAAGACGGAATAGAAAAATTTTAA Protein sequence : MRMYDLIMKKRDGGELTTEEIKFFVDGFTKGEIPDYQVSAMMMAIYFQKMNKRETADLTRAMFESGEVIDLSAINGIKVD KHSTGGVGDTTTIVLAPLVAAVGVPVAKMSGRGLGHTGGTLDKLESFPGLSVEMPIEKFINNVNKLKIAVAGQTANLAPA DKKLYALRDVTATVDNMSLIASSIMSKKIASGADAIVLDVKTGSGAFMKTEENSFALAQEMVDIGNHVGRNTIGVITDMD QPLGYAVGNALEIKEAIDTLKGEGPEDLTELCLTLGSHMVVLGGKAKDAKEARAMLEEVIKNGKGIEKLKEFVAAQGGNP NSVDDTSLLPSASIVEPVLATEDGYVKAIKADDVGIAALVLGAGRETKESEIDLGVGLVLHKKIGDFVKKGEAIATIYAN DEGKQKESEKRLRAAYTFVGEKVETKKLIRGIVTKDGIEKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-68 | 46 |
