Gene Information

Name : NT01CX_1448 (NT01CX_1448)
Accession : YP_877529.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Virulence
Product : ferric enterobactin transport ATP-binding protein fepC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 606498 - 607289 bp
Length : 792 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGCTAAAAATAAAAGATTTTAAAATAGGATATGATGACAAAGTAATAGTTAAGGACTTTAGCTTGCATGTACAAAAAGG
CGATATGCTTACAATAATAGGTCCTAATGGTTCAGGAAAATCAACAGTTTTAAAAGCTGTAGGAAGACTTTTAAAACCAA
TGGATGGCGTTGTTTATTTAGATGGAAAACTACTTCAAGAAATGAACAATAAAGAAATAGCTAAAGAAATGGCGTGTCTA
TCTCAACATAATTCAGCTCCTAAAGATATGACCATAAGAAAGATAGTTTCTTTTGGACGAAATCCTCACAAAAATTGGTT
TCAAGGATTAAATAAAGAAGATGAAGATATAGTTGCTTGGGCAATAGAAAAAACAAATTTGTCTCACATGGAAAATAAAA
ATATATCAGATATATCAGGAGGAGAAAGGCAAAGGGCTTGGATTGCTATGGCACTTGCACAAAAGCCAAAGGTACTTCTT
TTAGATGAACCAACTACTTATCTTGATATAAATAATCAAATAGAGATACTAGAACTTGTAAAAGAATTAAATGAAAAATT
AAATTTAACAGTTGTTATGGTTCTTCATGATTTAAATCAAGCAGCAAAGTATAGTAGTGAAGTTTTGGTTTTGAAAAATG
GAGAAATAAAAGCACAAGGAAAACCAGAAGATATTTTAGATAAAAGCCTAATAAGAAGTGTTTACAATGTTGACATGGAT
ATATTAAAAAATCAATTTGGAGAAAAAATAATTTTCATTCCAAAGAAGGTATACAAAGAAAAGGCTTTGTAA

Protein sequence :
MLKIKDFKIGYDDKVIVKDFSLHVQKGDMLTIIGPNGSGKSTVLKAVGRLLKPMDGVVYLDGKLLQEMNNKEIAKEMACL
SQHNSAPKDMTIRKIVSFGRNPHKNWFQGLNKEDEDIVAWAIEKTNLSHMENKNISDISGGERQRAWIAMALAQKPKVLL
LDEPTTYLDINNQIEILELVKELNEKLNLTVVMVLHDLNQAAKYSSEVLVLKNGEIKAQGKPEDILDKSLIRSVYNVDMD
ILKNQFGEKIIFIPKKVYKEKAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-45 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-45 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-44 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-44 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-44 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-44 41
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01CX_1448 YP_877529.1 ferric enterobactin transport ATP-binding protein fepC VFG0925 Protein 2e-42 41