Gene Information

Name : NT01CX_1447 (NT01CX_1447)
Accession : YP_877528.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 605497 - 606495 bp
Length : 999 bp
Strand : +
Note : identified by match to protein family HMM PF01032

DNA sequence : 
ATGAAAAATATGAGCAATAATATGAGCAATAAATTAAAAGTGTTAATAATATTGATGTCATTAGTCTTATTAGTAGCTTT
AATAATTGTTACTATTGGTGTTGGTAGTGTAAGTATATCAGTAAAAGAAATTATAGATACTTTCTTAGGACACGGAAATG
AAATAAATGAAAGTATTATTATGGATATGAGATTACCTAGAATAATCATAGCTGTTTTTGTTGGAGCGGGACTTTCAATA
TCAGGTGCTTTACTTCAATCAATCATGAATAATCCACTAGCGGATCCTGGAATTACAGGGGTATCATCTGGAGCTAGTCT
CCTTGCTATAACAGTTATGTTATACTTCCCAAAGTTACATGGAGTATTACCTCTTATGGCTTTTTTAGGTGCAATAGTTG
CTTGTATGATGGTATTTATATTATCTTGGGACAAAGGATTAAATCCTATGAGGGTTATTTTATCAGGTGTTGCAGTAAAT
GCTGTTTTTGTTGGAGCAACATCATTGCTTTCAATATTAAATAGTGACAAGATACAAGGTATTTTATTATGGATAAATGG
AAGTATAGCCTACAAAGGTTGGACAGAAGTAAAATATTTAGTTCCATATAGTGTTATAGGAATAATTCTTGCCTTACTTT
GTGCAAAAGGAGCTAATTTATTAGCATTAGGGGATGATGTAGCAACTAATCTTGGAGTAAATGTAACAAAAACTAGATTT
TTAGTAGCTTTAGTTGCAGTATTTTTAGCAGGGGTTAGCACATCAGTTGTAGGTATTATAGGGTTTATAGGTCTTATAGT
TCCTCATATATGTAGGTTAATACTTGGATATGATTATAAATATTTAATTCCCATGAGTGCGATAATGGGGGGGATATTAT
TACTTCTTGCAGATACTTTGGCAAGATTTGTTGCAAGACCTGTGGAGCTTCCAGTAGGTATTTTAATGGCTATGCTAGGT
GGACCATTTTTCTTATTCCTTTTAAGGAGGCGTAAATAA

Protein sequence : 
MKNMSNNMSNKLKVLIILMSLVLLVALIIVTIGVGSVSISVKEIIDTFLGHGNEINESIIMDMRLPRIIIAVFVGAGLSI
SGALLQSIMNNPLADPGITGVSSGASLLAITVMLYFPKLHGVLPLMAFLGAIVACMMVFILSWDKGLNPMRVILSGVAVN
AVFVGATSLLSILNSDKIQGILLWINGSIAYKGWTEVKYLVPYSVIGIILALLCAKGANLLALGDDVATNLGVNVTKTRF
LVALVAVFLAGVSTSVVGIIGFIGLIVPHICRLILGYDYKYLIPMSAIMGGILLLLADTLARFVARPVELPVGILMAMLG
GPFFLFLLRRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01CX_1447 YP_877528.1 iron compound ABC transporter permease BAC0163 Protein 8e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT01CX_1447 YP_877528.1 iron compound ABC transporter permease VFG1043 Protein 7e-29 42