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Name : potB (NT01CX_1227) Accession : YP_877310.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter permease Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 336376 - 337197 bp Length : 822 bp Strand : + Note : identified by match to protein family HMM PF00528 DNA sequence : ATGAAAAAATGGTTATCCTCTCCGTATATAATCTGGAGTGTTTTGTTTATAGTTTTTCCATTATTTTTAGTAGTTTATTT TAGTTTTACTGGTGGAGATACAGGAACACATTTTACTTTAAATAACTATAAAGTTTTGGCTCAGCCACTTTATGTTAAAG TATTTATGCGATCTATAAATCTTGCTCTTGTATCAACTGTAGTTTGTTTAATTGTTGGATATCCAATGGCAATGATACTT GCTGATAAAGAAATAAATAAAACAGGTTTAGCAGTTTTGTTATTTGTTGTGCCTATGTGGATGAATTTTTTACTTAGAAC ATATTCTTGGATTGCTATTCTAGGAAAGAATGGATTTATAAATACGGTTTTAGAAAGTTTAGGTATGCCTAAGTTAAATC TTTTATATAATAGCGGAGCAGTTGTGCTTGGAATGGTATATAACTTTCTTCCTTTTATGGTTTTACCTATATATACTGTT CTTTCTAAAATGGACAAAAGTATAATAGAAGCTGCAAGTGATCTTGGAGCAAATAAAGTTACGATTTTTAGAAAAATTAT TTTCCCACTAAGTCTTCCAGGTGTTATGTCTGGAATAACTATGGTGTTTATGCCAGCTGTTAGTACATTCGTAATTTCAA GACTTTTAGGTGGTGGACAATATACGCTTTTAGGTAACCTTGTAGAACAACAATTCTTGGTTACTGGTGATTGGCATTTT GGATCATCAATATCTATTGTAATGATGATTTTAATATTAATTTCAATGCTTATTATGACAAAATATGATGGTGAACAGAC AGGAGGTGGAGGATTATGGTAA Protein sequence : MKKWLSSPYIIWSVLFIVFPLFLVVYFSFTGGDTGTHFTLNNYKVLAQPLYVKVFMRSINLALVSTVVCLIVGYPMAMIL ADKEINKTGLAVLLFVVPMWMNFLLRTYSWIAILGKNGFINTVLESLGMPKLNLLYNSGAVVLGMVYNFLPFMVLPIYTV LSKMDKSIIEAASDLGANKVTIFRKIIFPLSLPGVMSGITMVFMPAVSTFVISRLLGGGQYTLLGNLVEQQFLVTGDWHF GSSISIVMMILILISMLIMTKYDGEQTGGGGLW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 7e-38 | 43 |
