Gene Information

Name : argF (NT01CX_0745)
Accession : YP_879211.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 2438050 - 2439039 bp
Length : 990 bp
Strand : -
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGTAAATTTAAAGGGAAGAAGTTTACTTACACTAATGGATTATTCTAAGGAAGAAATAGAATATCTATTAGATTTAGC
ACTTAAACTTAAACAGGATAAGAAAAATGGAGTGATTTGTGATGAATTAAAGGGAAAAAATATTGCTTTAATTTTTGAAA
AAGATTCAACAAGGACGAGATGTTCTTTTGAAGTTGCAGCACATGATTTAGGGGCAAATACTACATATCTAGGACCACTA
GGTTCTCAGATAGGAAAAAAGGAATCTATAAAAGATACTGCAAGGGTACTTGGAAGAATGTTTGATGGTATTGAATATAG
AGGATTTGGACAAGAAGTAGTTGAAACCTTAGCTGAGTTTGCAGGGGTTCCCATTTGGAATGGTCTTACAAATGAAGATC
ATCCAACTCAAATACTAGCTGATTTTTTAACTATAAAAGAGCATATAAATAAGCCTTTAAATGAAGTTTCATTTGCTTAT
ATTGGAGATGGAAGAAACAATATGGCAAATGCACTTATGATAGGAGCCACTAAAGTTGGAATGAACTTTAAGATAATTGC
ACCAAAAGAATTATTTCCAGATGAAACTTTGGTTAAAAAGTGTATGGATGAAGCTAAAAAATCAGGATCAAATATAGAAG
TTACAAATGATATAAATAAAGTAAAAGGAATGGATGTAGTATATACAGATGTTTGGGTATCTATGGGTGAGGAAGAAAGT
GTATGGAAGGATAGAATAAATCTTTTAAATCCATATCAAATTAATATGGACATTATAAATAAAACAGAAAATCCTAATAT
TAAATTCATGCACTGCTTACCAGCTTTTCATAATACAGAAACTGTAATTGGAAAAAAGATATATGAAAAGTTTAAATTGA
ATGCATTAGAAGTTACAGATGAAGTTTTTGAAAGTAAGTATTCTATAGTATTTGATGAAGCTGAAAATAGACTTCATACA
ATAAAAGCTATTATACTTGCAACTCTTTAA

Protein sequence :
MVNLKGRSLLTLMDYSKEEIEYLLDLALKLKQDKKNGVICDELKGKNIALIFEKDSTRTRCSFEVAAHDLGANTTYLGPL
GSQIGKKESIKDTARVLGRMFDGIEYRGFGQEVVETLAEFAGVPIWNGLTNEDHPTQILADFLTIKEHINKPLNEVSFAY
IGDGRNNMANALMIGATKVGMNFKIIAPKELFPDETLVKKCMDEAKKSGSNIEVTNDINKVKGMDVVYTDVWVSMGEEES
VWKDRINLLNPYQINMDIINKTENPNIKFMHCLPAFHNTETVIGKKIYEKFKLNALEVTDEVFESKYSIVFDEAENRLHT
IKAIILATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-101 64
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-101 64
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-101 64
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-101 64
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-101 64
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-100 63
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-98 62