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Name : NT01CX_0629 (NT01CX_0629) Accession : YP_879095.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Unknown Product : glycine betaine/carnitine/choline transport ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 2311388 - 2312524 bp Length : 1137 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186 DNA sequence : ATGATTGAACTAAAAAATGTAAAAAAGACTTTTCAAAATACTGAAGTTTTAAAAGATATTAACTTAAAAATAGAAAAGGG TGAGCTTGTTGTACTTATAGGTCCTAGTGGGTGTGGAAAAACAACCACTCTAAAAATGTTAAATAAACTTATAAAGCCAA CATCGGGGAAAATATATATAAATGGCGAAGATATATCAAAAAAAGATTCAATAAAACTTAGAAGAAATATAGGATATGTA ATACAACAAACAGGATTATTTCCACATATGACAGTTGGGGATAATATTGGATTAATACCATATCTCGAGGGATGGGAAGA TGAGAAAATAAGAAATAAAACAATAGAATTATTAAATATGGTAGGGATGGAACCTAAAAAATATATAGATAGATATCCAA ATGAATTAAGTGGAGGACAACAACAAAGAATAGGTGTTGCAAGAGCCTTTGCTACAAATCCAGAAATAATTTTAATGGAT GAGCCTTTTTCAGCTTTAGATCCAATTACGAGGAATCAACTTCAAGATGAGCTTTTTAACATACAAGAAAAGATGAAAAA GACTATAGTGTTTGTTACTCATGATATGGATGAGGCGTTAAAATTAGCAGACAAGATATGCATTATGAAGGATGGAATTG TGCTTCAATATGATACTCCAGAAAACATACTTAAAAATCCATCTCATGGCTTTGTTGAAGAATTTATAGGAAAAAATAGA ATTTGGAATCAACCTGAATATATAAAAGCAGAGGATATAATAATAGAAAATCCAGTTAAAGCTGTTGGCAATAGAACTAT ATTACAAGCATCAGAAATAATGGCTGAAAGACATGTGGATAGTATTTTAGTTGTAGATAGAAACAATACATTAAAGGGAA TAGCTACCCTAAAAGATATAAGAAAAAGCAGAGAAAATGATAAAAAATTAATGCTTAAAGATGTTATGAATAGAGATGTA GTATGTGTAAATAAGGACAAGTCTATTGTAGATGTATTAGAAGTTATGAATATTAAAAACGTTGGATATATTCCAGTTGT TGATGAAAATAAAAAACTATTAGGATTAATTACTAGAAGTAGTTTAATTAATGTTTTAAGCGGACAATTTTTAGATGTAG AGGGGGTGGGGATGTAA Protein sequence : MIELKNVKKTFQNTEVLKDINLKIEKGELVVLIGPSGCGKTTTLKMLNKLIKPTSGKIYINGEDISKKDSIKLRRNIGYV IQQTGLFPHMTVGDNIGLIPYLEGWEDEKIRNKTIELLNMVGMEPKKYIDRYPNELSGGQQQRIGVARAFATNPEIILMD EPFSALDPITRNQLQDELFNIQEKMKKTIVFVTHDMDEALKLADKICIMKDGIVLQYDTPENILKNPSHGFVEEFIGKNR IWNQPEYIKAEDIIIENPVKAVGNRTILQASEIMAERHVDSILVVDRNNTLKGIATLKDIRKSRENDKKLMLKDVMNRDV VCVNKDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLITRSSLINVLSGQFLDVEGVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-53 | 43 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-53 | 43 |
