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Name : NT01CX_1087 (NT01CX_1087) Accession : YP_877171.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 204994 - 207435 bp Length : 2442 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861 DNA sequence : ATGATATTTGGAAGATTTACAGAAAGAGCGCAGAATATTCTTTACTATGCAAAGCAAGCAGCACAAGAATTTAGGCATGG ATATATTGGAACTGAACATATATTGCTTGGACTTTTAAAAGAAGATAAGGGAATGTCCAAAAATCTTTTAAATGATATGA ATGTAAATGAAGAAAATGTTAAGAATTTAATTGCCCAATATGAATCTTTTGGAGAATTTGAATTAAATCAAAAAGAGATA CCGCTAACTCCAAGAACAAAAAGATTATTGGAGCTTAGTTTACTTGAGGCAAGGGATAAAGGACATAATTATATTACTCC TGAACATATGCTTTTAGCTTTAATAAAAAAGGAAGACGGACTTGCTTATACTATACTAAATGATTTAGGAGTTAACTTTG AAAAACTTGAAGCCCAACTAGAAAATGATCCTAATTTGAAACAAGGAAAACAAGTTTCAGGAGAAAGTAATGAAAGAGTG TCTCATAATACACCTACTTTAGATAAGCATGGTCGTGATTTAACTAAGATGGCTGAGGAAGGAAAACTAGATCCTGTAAT AGGTAGAGGTGCTGAAACGGAAAGAGTCCTTGAGATTTTATGTAGAAGAATTAAAAATAATCCTTGCTTAATAGGAGATC CTGGAGTTGGAAAAACTGCTATTGCTGAAGGACTTGCACAAAAGATAGTGCAAGGTAATATACCAGAAATACTCAAAAAT AAAAGAGTTATAGCACTAGACATATCATCTATGGTAGCTGGTTCTAAGTATAGAGGTGAATTTGAAGAAAGAGTTAAGAA AATAATGGATGAAATATACAAAGACAAAAATGTAATTTTATTTATTGATGAAATTCACACTATAGTAGGAGCTGGTGGAG CTGAAGGGGCCATTGATGCTTCTAATATATTAAAACCTGCACTTGCAAGAGGTGAAATTCAATGCATAGGAGCTACAACT ATAGATGAATATAGAAAATATATAGAAAAGGATTCTGCACTGGAGAGAAGATTTCAACCAGTTAATGTAGGAGAGCCTAC AAAGGAAGAATCTATAGAAATATTAAAGGGACTTAGAGATAAGTATGAAGCTCATCATGGAGTTAAAATAACAGATGATG CAATAGTTGCAGCAGTTGAACTTTCAGATAGGTATATAACAGATAGATTTCTACCAGATAAAGCTATAGATTTAATAGAT GAAGCTGGTGCGAAGGTTAGAATAAAAAATCTAACAGCCCCACCAAGTTTAAAAGACATGGAAGCAGAACTTGAGAAGGT TGTTAAGGAAAAAGAAGATGCTGTTATAGTTCAAGATTTTGAGAAAGCTGCATCTTTGAGAGATAAGGAGAAAAACTTAA AGCAACAGTTAAAAGATTTTACTGACAACTGGAAAAAACAAAGCCACATGGTAACTGAAATTGTGTCTGAAGATCAAATA GCTGAGGTAGTATCTACTTGGAGCAATGTGCCAGTTGAAAAATTGACAGAAAAAGAAGCAGATAGATTATTAAAATTAGA AGAAACTCTTCACAAAAGGGTAATTGGTCAAAATGAAGCAGTTAAATCCATAGCAAGAGCTGTAAGACGTGCGAGAGTTG GACTTAAAGATTCTAAAAGACCAATAGGTTCATTTATATTTTTAGGACCTACTGGAGTTGGAAAGACAGAGCTATCAAAG GCACTTGCAGAAGCTATGTTTGGTGATGAAAATAATATGATAAGAATTGATATGTCAGAATACATGGAGAAACATGCAGT TTCAAGACTTGTTGGTTCTCCTCCAGGATATGTAGGACATGATGAGGGTGGACAATTAACAGAACAAGTAAGACGTCATC CTTATTCAGTAATTTTATTTGATGAAATTGAAAAAGCTCATCCAGAGGTATTTAACATACTACTTCAAATTTTAGAAGAT GGAAGACTTACTGATTCAAAAGGAAAGACTGTTGATTTTAAAAATACAATAATAATATTAACTTCAAATGTAGGTGCTTC AAGAATAAATAAGCAAAATACTTTAGGATTTTCAAGAAGTGAAGATGAAGCGGAAGATGAATATGAAAAGATGAAAGATA ATGTAATGGAAGAATTAAAAAATAGTTTTAGACCAGAATTTTTAAATAGAATTGACGATATTATTGTATTCCATTCATTA GATGAAGAAAACTTAAAGGAAATAGTTAAACTTATGCTAGATGAAGTATCAAATAGATTAAAAGATAAAGATATATATAT TGATTTTGATGATGAAACAGAAAAGCTTCTAGTTAAAAAAGGTATAGATGTAACTTATGGTGCAAGACCATTAAGAAGAA CTATAACAAGAATAATAGAAGATAAATTATCAGAAGAAATATTAAAGGGTGTTATAAAAAAAGGCGATAAAGTATATACT ACAGTTGAAAATAATGAGTTAATATTTAAGAAAATCAACTAA Protein sequence : MIFGRFTERAQNILYYAKQAAQEFRHGYIGTEHILLGLLKEDKGMSKNLLNDMNVNEENVKNLIAQYESFGEFELNQKEI PLTPRTKRLLELSLLEARDKGHNYITPEHMLLALIKKEDGLAYTILNDLGVNFEKLEAQLENDPNLKQGKQVSGESNERV SHNTPTLDKHGRDLTKMAEEGKLDPVIGRGAETERVLEILCRRIKNNPCLIGDPGVGKTAIAEGLAQKIVQGNIPEILKN KRVIALDISSMVAGSKYRGEFEERVKKIMDEIYKDKNVILFIDEIHTIVGAGGAEGAIDASNILKPALARGEIQCIGATT IDEYRKYIEKDSALERRFQPVNVGEPTKEESIEILKGLRDKYEAHHGVKITDDAIVAAVELSDRYITDRFLPDKAIDLID EAGAKVRIKNLTAPPSLKDMEAELEKVVKEKEDAVIVQDFEKAASLRDKEKNLKQQLKDFTDNWKKQSHMVTEIVSEDQI AEVVSTWSNVPVEKLTEKEADRLLKLEETLHKRVIGQNEAVKSIARAVRRARVGLKDSKRPIGSFIFLGPTGVGKTELSK ALAEAMFGDENNMIRIDMSEYMEKHAVSRLVGSPPGYVGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILED GRLTDSKGKTVDFKNTIIILTSNVGASRINKQNTLGFSRSEDEAEDEYEKMKDNVMEELKNSFRPEFLNRIDDIIVFHSL DEENLKEIVKLMLDEVSNRLKDKDIYIDFDDETEKLLVKKGIDVTYGARPLRRTITRIIEDKLSEEILKGVIKKGDKVYT TVENNELIFKKIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT01CX_1087 | YP_877171.1 | negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 58 |
| NT01CX_1087 | YP_877171.1 | negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 5e-153 | 50 |
