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Name : secA (NT01CX_0509) Accession : YP_878979.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2195830 - 2198334 bp Length : 2505 bp Strand : - Note : functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap DNA sequence : ATGGGATTGTTTGAAAAGATATTTGGTACATATAGTAGTAGAGAAATAAAAAAGATTATACCAATAATTAATAAAATAGA TTCTTATGAAGAAGAGTTTAAAAAATTAACAGATGAAGAGTTAAGAAATAAAACAGATGAATTCAAAGATATGTTAGCGA AGGGTAAAACATTAGATGATATATTACCAGAAGCGTTTGCTGTAGCAAGAGAGGCTTCAGCTAGAGTTCTTGGTATGAGA CACTTTAGAGAACAGCTTATAGGTGGTATTGTTCTTCACCAAGGTAGAATTTCGGAAATGAAAACAGGTGAAGGTAAAAC ATTAGTTGCAACACTTCCAGCATACTTAAATGCATTATCAGGCAAAGGTGTTCATGTAATTACAGTAAATGACTACTTAG CTAAAAGAGATAGAGATCAAATGTCACAACTGTATGGATTTTTAGGATTAACTACAGGAGTTATAGTTCATGACTTAGAT AATGAACAAAGACGTGAAGCTTATAATTGTGATATAACTTATGGAACAAATAATGAATTTGGATTTGACTATTTAAGAGA TAACATGGTTATTTATAAAGAAGAAAGAGTTCAAAGAAAGCTAAACTTCTGTATTGTGGACGAAGTTGACTCTATTTTAA TTGATGAAGCTAGAACTCCACTTATAATATCAGGAGAAGGAGATAACTCCACTGACTTTTACAAAGTTGCAGATTTCTTT GCTAAAACTTTAAAAGAAGATGATTATACAGTAGATGAAAAGACTAACTCAGTTATTTTAACTGAACAAGGTATTGAAAA GGCAGAAAAATTCTTCCATATAGATAACTATGGTGATGGAGATAATATGCAAATTCAACACCACGTAGTTCAAGCGTTAA AGGCTAATTACACAATGAAACGTGATAAGGACTATATGGTTAAAGATAATGAAGTTATAATAGTCGATGAATTTACAGGA AGACTTATGGAAGGTAGAAGATACAGTGACGGTCTTCACCAAGCTATAGAAGCTAAAGAAAATGTTAAAATTCAAAAAGA GTCAAAAACTCTTGCAACAATAACATTCCAAAACTACTTTAGAATGTATACAAAGCTTTCTGGTATGACAGGTACTGCTC AAACAGAAGAAGCTGAATTTAGAGAAATATATGGACTTGATGTAATAGTTATTCCTACACATAGACCAATTGCAAGAATA GATGCTCCAGATGTAGTTTATAAATCTGAAAAAGCTAAATTTAAAGCTATAGTTAATGAAATTGCTGAAACGTATAAAAA GCAACAACCAGTTCTTGTTGGTACAGTAAGTATAGAAAAATCTGAACTTCTATCAGATATGTTAAAGAGAAAAGGAGTCC CACATCAAGTATTAAATGCTAAGTATCATGAAAAAGAAGCTGAAATAATTTCTCATGCTGGTGAAAAAGGTATGGTTACT ATAGCTACTAACATGGCTGGTCGTGGTACTGATATTAAACTTGGAGAAGGCGTTGAAGAAGTAGGCGGACTTAAAGTAAT AGGTACAGAAAGACACGAATCAAGACGTATAGATAACCAATTAAGAGGACGTTCTGGTCGTCAAGGAGACCCTGGATATT CTAGATTCTATGTATCATTAGAAGATGATCTAATGAGAATATTTGCGTCAGATAGATTACAAGGCGTTGTTGAAAAATTA GGATTAACTGATGAAGATGCAATTGAAAGTAGAATGGTTAGTAATGCAATAGAAAACGCTCAAAAGAAAGTTGAAGGAAA TAACTTTGATGTAAGAAAGAGCGTATTACAATATGATGATGTTATGAATCAACAAAGAGAAGTTATTTACAAACAAAGAT CACAAGTTCTTGAAGGTGAATCTTTAAAAGAAGATATTCAAGAAATGATAAGATCTGTTATATCTGAAGCTGTTGATGCT CATATGAGTGGACTTGATGAAACTTTAGAAGAAGATTTAGAAAAATTATTAGCTTATCTACAAGAAATTTATTTACCAAA GAATGTTGTAACTGTAGATGAACTTAAAATAAAATCTGATGATGAAATAAAAGAAATTTTAATTGATATAGCAGAAAAAA TGTATAGTGAAAAAGAAGAAGAAGTAACTCCAGAAAGAATGAGAGAAATAGAAAGTGTAATTCTTCTAAGAATTGTTGAT ACTAAGTGGATGGATCACATTGATAATATGGATCATTTAAGACAAGGTATGGGACTTAGAGCTTATAGACAACAAGATCC AGTTCAAGCATATCAATTTGAAGGTAGTGAAATGTTTGATGAAATGATCAATGGAATAAAAACTGATACTGTAAAATACT TATTCCATATTCAAGTTGAAAAGAACATTGAAAGAGAAAGAGTTGCAAGAGAAACTTCTACTAATATAAATGATGGTGAA GGCGGAAGTCATGAGCCAATAAAGAGAAAAGAAGAAAAGATTGGTAGAAACGATCTTTGCCCATGCGGAAGTGGAAAGAA ATATAAAAATTGTTGTGGAAGATAG Protein sequence : MGLFEKIFGTYSSREIKKIIPIINKIDSYEEEFKKLTDEELRNKTDEFKDMLAKGKTLDDILPEAFAVAREASARVLGMR HFREQLIGGIVLHQGRISEMKTGEGKTLVATLPAYLNALSGKGVHVITVNDYLAKRDRDQMSQLYGFLGLTTGVIVHDLD NEQRREAYNCDITYGTNNEFGFDYLRDNMVIYKEERVQRKLNFCIVDEVDSILIDEARTPLIISGEGDNSTDFYKVADFF AKTLKEDDYTVDEKTNSVILTEQGIEKAEKFFHIDNYGDGDNMQIQHHVVQALKANYTMKRDKDYMVKDNEVIIVDEFTG RLMEGRRYSDGLHQAIEAKENVKIQKESKTLATITFQNYFRMYTKLSGMTGTAQTEEAEFREIYGLDVIVIPTHRPIARI DAPDVVYKSEKAKFKAIVNEIAETYKKQQPVLVGTVSIEKSELLSDMLKRKGVPHQVLNAKYHEKEAEIISHAGEKGMVT IATNMAGRGTDIKLGEGVEEVGGLKVIGTERHESRRIDNQLRGRSGRQGDPGYSRFYVSLEDDLMRIFASDRLQGVVEKL GLTDEDAIESRMVSNAIENAQKKVEGNNFDVRKSVLQYDDVMNQQREVIYKQRSQVLEGESLKEDIQEMIRSVISEAVDA HMSGLDETLEEDLEKLLAYLQEIYLPKNVVTVDELKIKSDDEIKEILIDIAEKMYSEKEEEVTPERMREIESVILLRIVD TKWMDHIDNMDHLRQGMGLRAYRQQDPVQAYQFEGSEMFDEMINGIKTDTVKYLFHIQVEKNIERERVARETSTNINDGE GGSHEPIKRKEEKIGRNDLCPCGSGKKYKNCCGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-123 | 41 |
