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Name : NT01CX_0220 (NT01CX_0220) Accession : YP_878724.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpC/mecB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1885424 - 1887721 bp Length : 2298 bp Strand : - Note : identified by match to protein family HMM PF00004 DNA sequence : ATGGAAATGTGTTCCATTTGCAAAAAGAATATAGCAACTATATACACAGCAAAGATAGAAGATGGAAAAACAAAAATGGT TGGAATATGTTTGGAGTGCGCTAAAAAAATGGGTATGCCCATAATGGATCAATTCATGAAGCAAGCGGGAATAACTTCAG AAGATATGGATAATCTAACAGAACAGATGAATAAAGTATTTGAAGAGACTAATATAGATGATTTAGCAAATAATAATTTT CTTACTAATGTTTTAAATGGAATATTTCCTAAAAATGATGAAGAAGATTATGCAGATAATTTAGATTCTCTTGAATTTGA TAAAGAGAAAACATCAGAGAAAGATAAAACTAATAGTGAAGGTATAAGAACTAAAAACATATTTAAGAATAAGAAAAAGA CAAAATATTTAAATAAATATGGAATAAATTTAACTGATAAGGCAAAAGAGCATAAGGTTGATAAAGTAGTTGGTAGAAAT AGAGAAATAGATAGAGTAATTCAAATTTTAAATAGAAGAAATAAAAATAATCCAATATTAATAGGTGAACCAGGTGTAGG TAAAACAGCTATTGCGGAGGGATTGGCAGTTAGAATTTCAGAAAAAAATGTTCCAGCAAAATTATTTGAGACTGAAGTGT ACTTGTTAGATCTTACAGCAGTTGTTGCAGGGACTCAATTTCGAGGGCAATTTGAAAGTAGAATGAAGTCCATAATTGAT GAAGCTAAATCAAATGGTAATGTTATATTGGTAATTGATGAGCTTCATAATATAATGGGTGCAGGAGAAGCACAAGGTGG CTCTATGAATGCTGCAAACATTTTAAAACCTGCTCTTGCAAGAGGTGAGATACAAGTAATAGGAGCAACCACTTTAGATG AGTATAGAAAATATATAGAAAAAGATTCTGCTCTAGAGAGAAGATTTCAACCTGTCTTAGTAGAAGAACCTACAGTTGAG GAAACTATAGAAATATTAGAAGGCATAAAAGATTACTATGAACAATATCATCAAGTTAAAATATCTCATGAAGTAATTGA AAACGCTGTAAATCTATCAGAAAGATATATAAATGATAGATTCTTACCTGACAAAGCTATAGATGTAATTGATGAAGCGA GTTCCAGAGCTAACTTAAAAAATAAAGGATTAGTTGAATTAAAGTCACTAGAAGATGAACTTGAAAAAGTTCAAAATGAA AAACAAAAGGCAGCTGATAGTGATGACTATGAAAAAGCAGCAGAATGTAAAGTAGAAGAATGCAGGTTAAAAGATAAAAT AGATGAATTGAGAAAACAATGTACTGATGTAGAATTAACCACTGAAGATATTGCATTTGTAATAGAAGCTTGGACTAAAA TACCAGTTCAAAGAATTACAGAAGAAGAAGGGGAAAAACTTATAAACCTAGAAGAAAGACTTCACAAAAGAGTTATAGGG CAAAATGAAGCAGTAAAATCTTTAGGGAGGGCAATACGTCGTAATAGATTAGGATTTAGAAAAAAGAAAAAACCAGCTTC ATTTATATTTGTTGGACCTACAGGAGTTGGAAAAACAGAACTTGTAAAAGCACTTGCAAGTGATTTATTTGAAAGTGAAG ATGCTTTAATTAGAATAGATATGTCTGAGTACATGGAAAAGCACACTGTATCTAAGTTAATTGGAGCGCCTCCAGGATAT GTAGGATATGATAATGGAGGACAATTAACAGAAAAAGTTAGAAGAAAGCCATATTCAGTAATACTTTTAGATGAAATAGA AAAAGCTCATCCAGATGTATTTAATATGTTGCTTCAAATACTTGAAGATGGAAGACTTACAGATAGCCAAGGAAGAATGG TTTCTTTTGAAAACACAGTAATTATAATGACATCAAATGTAGGTACTAACTTTAAAAGTGATAGCATAGGTTTTGGAAAA GAAGGCTATGATGCTATGGAAATCCGTGTTAAAGAAGCTTTAAAAGAAACATTTAGACCGGAGTTTATAAATAGAATAGA TGAAATAGTGGTATTTAACAATTTAAATAAAGAAGAATTATATAAAATCATTGATTTAATGATAGATGAAGTTAAAAATG AGATTAAAGGAAAGAAATTAACATTAACTATTGATGATACAGTAAAAGATTATATCCTAAAAATAGGATATGATAAAAAA TACGGTGCTAGACCTTTAAGAAGAGCTATACAAAGACATATTGAAGATGAAATAGCAGAAGCATATCTTCTTAAAAAGTT TAAAGAAGGTTCTAACATAAATGCAAAAGTAGTTGATGATAAAATTGTTTTAGAATAG Protein sequence : MEMCSICKKNIATIYTAKIEDGKTKMVGICLECAKKMGMPIMDQFMKQAGITSEDMDNLTEQMNKVFEETNIDDLANNNF LTNVLNGIFPKNDEEDYADNLDSLEFDKEKTSEKDKTNSEGIRTKNIFKNKKKTKYLNKYGINLTDKAKEHKVDKVVGRN REIDRVIQILNRRNKNNPILIGEPGVGKTAIAEGLAVRISEKNVPAKLFETEVYLLDLTAVVAGTQFRGQFESRMKSIID EAKSNGNVILVIDELHNIMGAGEAQGGSMNAANILKPALARGEIQVIGATTLDEYRKYIEKDSALERRFQPVLVEEPTVE ETIEILEGIKDYYEQYHQVKISHEVIENAVNLSERYINDRFLPDKAIDVIDEASSRANLKNKGLVELKSLEDELEKVQNE KQKAADSDDYEKAAECKVEECRLKDKIDELRKQCTDVELTTEDIAFVIEAWTKIPVQRITEEEGEKLINLEERLHKRVIG QNEAVKSLGRAIRRNRLGFRKKKKPASFIFVGPTGVGKTELVKALASDLFESEDALIRIDMSEYMEKHTVSKLIGAPPGY VGYDNGGQLTEKVRRKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRMVSFENTVIIMTSNVGTNFKSDSIGFGK EGYDAMEIRVKEALKETFRPEFINRIDEIVVFNNLNKEELYKIIDLMIDEVKNEIKGKKLTLTIDDTVKDYILKIGYDKK YGARPLRRAIQRHIEDEIAEAYLLKKFKEGSNINAKVVDDKIVLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-151 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT01CX_0220 | YP_878724.1 | negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 1e-157 | 56 |
| NT01CX_0220 | YP_878724.1 | negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 2e-148 | 55 |
