|
Name : NT01CX_0884 (NT01CX_0884) Accession : YP_876990.1 Strain : Clostridium novyi NT Genome accession: NC_008593 Putative virulence/resistance : Unknown Product : single-stranded DNA binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0629 EC number : - Position : 12086 - 12532 bp Length : 447 bp Strand : + Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621 DNA sequence : ATGAATAGAGTTGTTTTAGTTGGAAGATTGACAAAAGATCCAGAACTAAGATTTACACCAGGAGCTGGGAAAGCAGTTGC AACTTTTACTTTAGCTGTTAACAGAAGGTTTAAAAGCCAAGGCCAACCTGAAGCTGACTTTTTACCTATCGTAGTATGGG GAAAACAAGCTGAAAACACTGCCAACTATGTTGGTAAGGGTAGTCAAGTTGGAGTGAGTGGTTCAATACATACAAGAAGT TATGAAGCTAAAGATGGAACAAGAAGATATGTTACAGAGGTTGTAGCTGATGAGGTGCAATTCTTAGATTCAAGAAGTGC TGTCTCAAGAACAGAGCCAAGGTCTACAGGAATGAATGAAAATGATTCATCTAATGGTGGCGATATTTTCGATCAAGGTT ATGATGAAGAAATTACTCCAATAGATGATGGAGATATACCATTCTAA Protein sequence : MNRVVLVGRLTKDPELRFTPGAGKAVATFTLAVNRRFKSQGQPEADFLPIVVWGKQAENTANYVGKGSQVGVSGSIHTRS YEAKDGTRRYVTEVVADEVQFLDSRSAVSRTEPRSTGMNENDSSNGGDIFDQGYDEEITPIDDGDIPF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAOV_0290 | YP_005735807.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa1 | Protein | 1e-22 | 65 |
| SAV0864 | NP_371388.1 | ssDNA-binding protein | Not tested | ¥ÕSa1 | Protein | 2e-22 | 65 |
| SAOV_1081 | YP_005736576.1 | ssDNA-binding protein | Not tested | ¥ÕSa2 | Protein | 2e-22 | 65 |
| SH1792 | YP_253707.1 | single strand DNA binding protein | Not tested | ¥ÕSh1 | Protein | 4e-22 | 62 |
| SEQ_0802 | YP_002746140.1 | single-strand binding protein | Not tested | ¥ÕSeq2 | Protein | 2e-19 | 61 |
| SAOV_1956c | YP_005737400.1 | Single-stranded DNA-binding protein, phage associated | Not tested | ¥ÕSa3 | Protein | 2e-19 | 61 |
| ef0020 | AAM75226.1 | EF0020 | Not tested | Not named | Protein | 3e-22 | 45 |
| ssb-2 | NP_814280.1 | single-strand binding protein | Not tested | Not named | Protein | 4e-22 | 45 |
| ef0030 | AAM75236.1 | EF0030 | Not tested | Not named | Protein | 3e-18 | 44 |
| ssb-3 | NP_814291.1 | single-strand binding protein | Not tested | Not named | Protein | 5e-18 | 44 |
| EFAU085_00699 | YP_008394223.1 | single-strand binding protein | Not tested | Not named | Protein | 3e-18 | 41 |
