Gene Information

Name : NT01CX_0884 (NT01CX_0884)
Accession : YP_876990.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Unknown
Product : single-stranded DNA binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 12086 - 12532 bp
Length : 447 bp
Strand : +
Note : identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence :
ATGAATAGAGTTGTTTTAGTTGGAAGATTGACAAAAGATCCAGAACTAAGATTTACACCAGGAGCTGGGAAAGCAGTTGC
AACTTTTACTTTAGCTGTTAACAGAAGGTTTAAAAGCCAAGGCCAACCTGAAGCTGACTTTTTACCTATCGTAGTATGGG
GAAAACAAGCTGAAAACACTGCCAACTATGTTGGTAAGGGTAGTCAAGTTGGAGTGAGTGGTTCAATACATACAAGAAGT
TATGAAGCTAAAGATGGAACAAGAAGATATGTTACAGAGGTTGTAGCTGATGAGGTGCAATTCTTAGATTCAAGAAGTGC
TGTCTCAAGAACAGAGCCAAGGTCTACAGGAATGAATGAAAATGATTCATCTAATGGTGGCGATATTTTCGATCAAGGTT
ATGATGAAGAAATTACTCCAATAGATGATGGAGATATACCATTCTAA

Protein sequence :
MNRVVLVGRLTKDPELRFTPGAGKAVATFTLAVNRRFKSQGQPEADFLPIVVWGKQAENTANYVGKGSQVGVSGSIHTRS
YEAKDGTRRYVTEVVADEVQFLDSRSAVSRTEPRSTGMNENDSSNGGDIFDQGYDEEITPIDDGDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-22 65
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 2e-22 65
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 2e-22 65
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 4e-22 62
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-19 61
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-19 61
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-22 45
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-22 45
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 5e-18 44
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 3e-18 44
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-18 41