Gene Information

Name : fliP (NT01CX_1916)
Accession : YP_877989.1
Strain : Clostridium novyi NT
Genome accession: NC_008593
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1121747 - 1122520 bp
Length : 774 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAAAAAAAAGAAATTTAGTATAGTTATTTTGGTTATGTTTGCTCTTGCAATATTAGGAGCTACAAAGGCATACGCTGC
ACCAAATACAATACCAATTCCAAAAATAAATGTTTCTGTGGATCAAGCAAGTAGTCCTAAGGATTATGTAGACAATATAA
AGTTACTTATTATGTTGACTGTAATTTCTTTGCTACCATCTTTTCTAGTTATGATGACAAGTTTTACTAGAATAATAGTA
GTTTTAGGATTTATGAGAAATGCACTTGGAACTCAACAAGCTCCACCTAACCAAATCTTAGTAGGACTAGCTTTGTTTTT
GACAATTTTTATTATGACTCCTACTTACAAGACTATAAACAAAGAAGCTATAAAACCGTTTTTGGAAAATAAAATAACTC
AAACAGAGGCACTTAACAATGCTGCAAAGCCAATGCGTGAGTTTATGTTAAAGCAAACAAGAGATAAAGACTTAGAATTA
TTCTTAGATGTTTCAAAAACAGATAAAAAAAATATAACAAAAGAAAATGTTCCTATGTATGTAGTTATTCCATCATTTAT
AATTAGTGAACTTAAAACAGCTTTTAAAATAGGATTTTTACTTTTTGTACCGTTTTTAATTATAGACATTGTTGTAGCAA
GTGTGCTTATGTCTATGGGAATGTTTATGCTACCACCAGTCATGATTTCTCTTCCATTTAAGTTACTATTATTTGTTATG
GTTGATGGATGGTATCTACTGGTTAAATCGTTGGTAATGGGATACTCGTCGTGA

Protein sequence : 
MKKKKFSIVILVMFALAILGATKAYAAPNTIPIPKINVSVDQASSPKDYVDNIKLLIMLTVISLLPSFLVMMTSFTRIIV
VLGFMRNALGTQQAPPNQILVGLALFLTIFIMTPTYKTINKEAIKPFLENKITQTEALNNAAKPMREFMLKQTRDKDLEL
FLDVSKTDKKNITKENVPMYVVIPSFIISELKTAFKIGFLLFVPFLIIDIVVASVLMSMGMFMLPPVMISLPFKLLLFVM
VDGWYLLVKSLVMGYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_877989.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-52 52
fliP YP_877989.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-56 50
fliP YP_877989.1 flagellar biosynthesis protein FliP VFG2494 Protein 1e-54 50
fliP YP_877989.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-59 49