Gene Information

Name : Acel_0220 (Acel_0220)
Accession : YP_871980.1
Strain : Acidothermus cellulolyticus 11B
Genome accession: NC_008578
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 233834 - 236353 bp
Length : 2520 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sma:SAV4697 putative ATP-dependent Clp protease

DNA sequence :
ATGTTCGAGCGGTTCACCGACCGAGCCCGGCGAGTGGTTGTGCTCGCGCAAGAAGAAGCGCGCATGCTCAACCACAATTA
CATCGGCACTGAACACATCCTTCTTGGCCTGATTCATGAAGGTGAGGGAGTCGCCGCAAAGGCGCTGGAGAGCCTCGGCA
TCTCCCTGGAGGGTGTCCGCCAGCAGGTCGAAGAGATCATCGGCCAGGGGCAGCAGGCGCCTTCCGGTCACATCCCGTTC
ACGCCGAGAGCCAAGAAGGTTCTCGAACTCAGCCTCCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA
CATCCTGCTCGGCCTGATCCGGGAAGGTGAGGGAGTCGCCGCCCAGGTTCTGGTCAAGCTGGGCGCCGACCTCAACCGGG
TCCGCCAGCAGGTCATCCAATTGCTCTCCGGTTACCAGGGCAAGGCGGAGGCGACTGCCGGAGGCCCGGCGGAGGGCACT
CAGTCGACGTCCCTCGTTCTCGATCAATTCGGCCGCAACCTCACGCAGGCGGCCCGCGAGGGCAAGCTCGACCCGGTGAT
CGGACGGGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTCTCCCGGCGTACCAAGAACAATCCGGTTCTCGTCGGTGAGC
CCGGCGTCGGCAAGACGGCCATCGTCGAGGGGCTGGCTCAGGCGATCGTCAAGGGCGAGGTGCCGGAGACCCTGAAAGAC
AAGCAGCTGTACACGCTCGACCTGGGTGCGCTGGTCGCCGGCAGCCGGTACCGCGGCGATTTCGAGGAGCGGCTCAAGAA
GGTGCTCAAAGAGATCCGCACCCGCGGCGACATCGTCCTGTTCATCGATGAGCTGCACACCCTCGTCGGCGCCGGCGCCG
CCGAGGGTGCGATTGACGCGGCCTCCATCCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCAGACCATCGGGGCGACGACG
CTCGATGAGTACCGCAAGCACCTGGAGAAGGACGCCGCCCTCGAGCGGCGGTTCCAGCCGATCCAGGTCAATGAGCCGTC
ACTAGCGCACACCATCGAAATTCTGAAGGGCCTGCGTGATCGGTACGAGAGTCACCACAAGGTCACCATCACCGACGGCG
CCCTGGTCGCGGCCGCGCAGTTGGCTGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCCATCGACCTCATCGAT
GAGGCCGGGTCACGGCTGCGGATCCGCCGGATGACCGCGCCGCCGGACCTGCGGGAATTCGACGAGAAAATCGCCGCGGT
TCGGCGCGAGAAAGAGAGCGCGATCGACGCGCAGGATTTCGAGAAGGCCGCGGCGCTCCGCGACAAAGAAAAGCAGCTCC
TTGCCGCGAAGGCGCAGCGGGAGCGGGAGTGGAAAGCCGGTGACATGGACGTCGTCGCGGAGGTCGACGAGGACCTCATC
GCCGAGGTTCTCTCCGCGGCCACCGGGATTCCGGTCTTCAAGCTCACCGAAGAGGAGACGGCCCGGCTCCTGCGGATGGA
AGAAGAGCTGCACAAGCGGGTGATCGGCCAAGACGAGGCCATCAAGGCGCTGTCGCAGGCGATCCGGCGTACCCGCGCCG
GGTTGAAAGACCCGAAGCGGCCGGGTGGTTCGTTCATCTTCGCCGGACCATCCGGGGTTGGGAAGACCGAGCTCTCCAAG
GCGCTCGCCGAATTCCTGTTTGGTGACGAGGATTCGCTCATCCAGTTGGACATGAGCGAATTCATGGAGAAGCACACGGT
GTCGCGGCTCTTCGGTTCCCCGCCTGGATATGTCGGGTACGACGAGGGCGGGCAGCTGACCGAGAAGGTGCGCCGCAAGC
CGTTCTCCGTCGTCCTCTTCGACGAGGTGGAGAAGGCCCACCCGGACATTTTCAATTCGCTCCTGCAAATTCTCGAGGAC
GGACGCCTCACCGACGCCCAGGGGCGGGTCGTCGATTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
CGACATCGCCAAGGGCTTCAACATGGGGTTCTCCAAGGAGAACGACACCCAAGGCAGTTACGAGCGGATGCGGGCCAAGG
TGCAGGACGAATTGAAGCAGCACTTCCGGCCCGAATTCCTCAACCGGGTGGACGACATCATCGTCTTCCACCAGCTCACC
GAGGACGAGATCGTCAAGATCGTCGACTTGATGATCGCGAAGGTGGACGAACGGCTGCGCGATCGCGACATGTCCATCGA
GCTCACCCCGGCGGCGAAGGCGCTCCTCGCCCAGAAGGGGTACGACCCGGTGCTCGGCGCACGGCCGTTGCGGCGGACCA
TCCAGCGCCTGGTCGAGGATCCGGTCAGCGAGAAGATTCTCTTCGGTGAATTGCGGCCCGGTCACATCATCGTGGTCGAT
GCGGAGAACGTGGGGACGCCGGACGCCCGGCTCACCTTCCGCGGCGAACCGAAGCCGGCCGCCGTGCCGGAGACCGCGGT
GGTTGGCTCCGAGCCGGAGCAACCGACGACGAACCGCTGA

Protein sequence :
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKAEATAGGPAEGT
QSTSLVLDQFGRNLTQAAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLVGEPGVGKTAIVEGLAQAIVKGEVPETLKD
KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIVLFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVNEPSLAHTIEILKGLRDRYESHHKVTITDGALVAAAQLADRYISDRFLPDKAIDLID
EAGSRLRIRRMTAPPDLREFDEKIAAVRREKESAIDAQDFEKAAALRDKEKQLLAAKAQREREWKAGDMDVVAEVDEDLI
AEVLSAATGIPVFKLTEEETARLLRMEEELHKRVIGQDEAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDSLIQLDMSEFMEKHTVSRLFGSPPGYVGYDEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDAQGRVVDFKNTVIIMTTNLGTRDIAKGFNMGFSKENDTQGSYERMRAKVQDELKQHFRPEFLNRVDDIIVFHQLT
EDEIVKIVDLMIAKVDERLRDRDMSIELTPAAKALLAQKGYDPVLGARPLRRTIQRLVEDPVSEKILFGELRPGHIIVVD
AENVGTPDARLTFRGEPKPAAVPETAVVGSEPEQPTTNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 74
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-97 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acel_0220 YP_871980.1 ATPase VFG0079 Protein 0.0 61
Acel_0220 YP_871980.1 ATPase VFG0080 Protein 5e-153 52
Acel_0220 YP_871980.1 ATPase VFG2084 Protein 3e-89 41