Gene Information

Name : Acel_1179 (Acel_1179)
Accession : YP_872937.1
Strain : Acidothermus cellulolyticus 11B
Genome accession: NC_008578
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1312101 - 1312862 bp
Length : 762 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa46550 putative ABC transporter ATP-binding protein

DNA sequence : 
GTGGACGACACGGCACAGGGTGCTGTTCGTGCGGTTGCCGCTCGAAATCTGACAAAGGTGTACGGCGCCGGTGACACCGC
GGTCCGGGCGCTCAACGACGTCACGCTCGAATTCTTCCGCGGGCAGTTCAGCGCGATCATGGGCCCGTCGGGTTCCGGAA
AATCGACATTGATGCATTGCCTGGCCGGCTTAGATTCGGTTACGTCCGGTCACGTCTATATCGGAGATCTCGACATCACG
ACCCTTGATGACCGGGCCCTAACCCGGTTGCGCCGTGAATCGATCGGATTTGTTTTCCAGTCGTTCAATTTGGTGCCGAC
CCTGACGGCCCTGGAGAACATTACGCTGCCGCTGGACATCGCGCGGCGCAAACCCGACCAGGCCTGGCTCGACAGCCTGA
TTGACGCGATTGGGTTGCGGGATCGGTTGCGGCACAAGCCGACGGAACTCTCCGGCGGCCAGCAGCAGCGCGTCGCCTGC
GCCCGTGCGTTGGCGGCCAAACCAGCCGTGGTTTTCGCGGACGAGCCGACCGGTAATCTCGATTCCCGGTCCGCGACCGA
GGTGCTCGGGCTGCTCCGCTGGTTCGTCAAAGAACTCGGCCAGACCATCGTCATGGTCACCCACGACCCGGCAGCGGCCA
GCTATGCCGACCGCGTCGTGTTCCTGCGCGACGGTCAGGTGGTCGGCGAATTGCCCGCACCCACGCAGCAGGCCATTCTC
GACCAACTGGCGGTCCTCGAGACGCCGGTGGTGAGCCGCTGA

Protein sequence : 
MDDTAQGAVRAVAARNLTKVYGAGDTAVRALNDVTLEFFRGQFSAIMGPSGSGKSTLMHCLAGLDSVTSGHVYIGDLDIT
TLDDRALTRLRRESIGFVFQSFNLVPTLTALENITLPLDIARRKPDQAWLDSLIDAIGLRDRLRHKPTELSGGQQQRVAC
ARALAAKPAVVFADEPTGNLDSRSATEVLGLLRWFVKELGQTIVMVTHDPAAASYADRVVFLRDGQVVGELPAPTQQAIL
DQLAVLETPVVSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acel_1179 YP_872937.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-31 48
Acel_1179 YP_872937.1 ABC transporter-like protein CP001581.1.gene598.p Protein 9e-43 47
Acel_1179 YP_872937.1 ABC transporter-like protein CP001581.1.gene798.p Protein 3e-40 46
Acel_1179 YP_872937.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-40 44
Acel_1179 YP_872937.1 ABC transporter-like protein NC_012469.1.7685735. Protein 3e-28 41