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Name : Shewana3_0713 (Shewana3_0713) Accession : YP_868357.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Unknown Product : primary replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 829554 - 830960 bp Length : 1407 bp Strand : + Note : KEGG: son:SO3917 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGTCACAACAAGGTGCGTTTAAACCTAAGAATAAGCCGACAGATGTGCAGGTCGATAGCTTAAAGCTGCCGCCGCATTC GATTGAGGCTGAACAATCGGTCTTAGGTGGCCTGATGTTAGACGCCGACGCTTGGGATAAAGTGGCCGAGACTGTGGTGA AAGAGGATTTTTATTCCCGCTCCCACCGAATGATTTTTGCGGCCATGCACCGTTTGGTCGAAAGTGGTCAACCCATTGAC TTAATTACGGTTTCTGAACAACTTGAAGTTGAAAATCAACTCGAAGAAGCGGGCGGCTTTGCCTATTTAGGTGAGATCGC CAAAAACACTCCGAGCGCGGGTAACATTGTTTCCTACGCCGAGATTGTGCGCGAGCGCGCCGTGGTGCGGGAGATGATCC GCGTCGCCCATGAGATTGCCGATGCGGGTTACAATCCCGAGGGGCGTGACTCCAGCGCCTTGCTCGACTTGGCCGAGAGT AAAGTCTTTAAGATTGCCGAGCAGCGCACCAATGCCAACGAAGGTCCCGAAGGCATTAAAACCATTCTCGAAAAAACCGT CGATAAGATTGAGCAGCTCTACAACAACCCACACAACGGTGTGACAGGGGTGTCGAGTGGTTTTAGCGATCTCGACCGTA TGACTGCGGGCTTCCAATCCGGCGACTTGATTATCGTCGCGGCGCGTCCTTCTATGGGTAAAACCACCTTCGCGATGAAC CTCTGCGAGCAGGCGGCGATGAATGAAGACAAACCTGTGCTGATTTTCAGTCTCGAGATGCCCTCGGAACAGATCATGAT GCGTATGTTGGCCTCCTTGGGCCGCGTCGACCAAACTAAAATCCGTACCGGACAACTGGATGATGAGGATTGGGCGCGGG TATCCTCGACCATGGGGATTATGCTCGAGCAGGGCAAGATGTATATCGACGACGGTTCTGGCTTAACCCCGACCGAAGTG CGCAGCCGTGCTCGCCGTATCGCCCGTGAACATGGCGGCTTATCGATGATCATGGTCGACTACTTGCAGCTGATGCAAGT ACCTGCGTTATCGGACAACCGTACCCTAGAAATCGCCGAAATTTCTCGATCTCTCAAAGCATTGGCTAAAGAGTTAGAGA TCCCCGTGATTGCACTTTCTCAGCTTAACCGCTCGCTCGAACAACGTGCCGATAAGCGCCCAGTAAACTCGGACTTACGT GAATCGGGTTCTATTGAGCAGGATGCGGACCTCATCATGTTTATTTACCGTGATGAGGTGTATAACAACGACTCTCCCGA TAAGGGCACCGCAGAAATCATTATCGGTAAGCAGCGTAACGGCCCCATTGGACGTGTGCGCTTGACCTTCCAAGGCCAGT TTTCCCGTTTTGATAATTACGCTGGCCCGCAGTTTGAAGAAGATTAA Protein sequence : MSQQGAFKPKNKPTDVQVDSLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSRSHRMIFAAMHRLVESGQPID LITVSEQLEVENQLEEAGGFAYLGEIAKNTPSAGNIVSYAEIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAES KVFKIAEQRTNANEGPEGIKTILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDRMTAGFQSGDLIIVAARPSMGKTTFAMN LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGIMLEQGKMYIDDGSGLTPTEV RSRARRIAREHGGLSMIMVDYLQLMQVPALSDNRTLEIAEISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLR ESGSIEQDADLIMFIYRDEVYNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-104 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 3e-104 | 52 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 5e-101 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 6e-104 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-105 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-95 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-95 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-86 | 46 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-83 | 45 |
