Gene Information

Name : Shewana3_0677 (Shewana3_0677)
Accession : YP_868321.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 795919 - 796896 bp
Length : 978 bp
Strand : -
Note : TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family

DNA sequence :
ATGGTAGACCAATCACAATTGCGCCAGTGGGGCTGTAAAGTCATCGATATTGAAAAATCGGCCCTCGACAATCTTTATCA
ATATGTCGATTCCGTTGAATTTGCCCAAGCCTGCGAGTTAATTCTCAACTGCACCGGCAAAGTGATAGTGATGGGGATGG
GGAAATCAGGCCACATTGGCAATAAAATCTCGGCCACCCTCGCCAGCACAGGCACCCCAGCGTTTTTTGTCCACCCCGGC
GAAGCCAGCCATGGTGACCTAGGCGTGCTTTCGGACAATGATGTAATTCTTGCGATTTCAAACTCGGGCGAGTCGAGCGA
AATCCTCGCGCTGATGCCGGTCATTCAACGTAAAGCCATTCCCGTGATTGCCATGACAGGCAAGCCAGAATCCACCATGG
CGCGTCTCTCTAAAATTCATTTATGTATTGAGGTGCCAGAGGAAGCCTGTCCGCTTGGGCTGGCGCCAACTTCAAGCACC
ACGGCAACCTTAGTCATGGGCGATGCCATCGCCATTGCGCTGCTGCAAGCTAAAGGCTTTACCCGGGAAGATTTCGCCAT
GTCCCATCCGGGCGGCGCCTTAGGTCGTAAGCTGCTGCTAAAAGTCAGCAACGTGATGCACAGCGGTGATGATTTACCTT
TGGTTAAACACGATATCTGCATTACCGATGCCCTGTATGAGATCTCCAAGAAAGGCTTGGGCATGACTGCGGTTATCGAT
GAGCAAAACAAACTCGTGGGTATCTTTACCGACGGCGATCTGCGCCGGGTTATCGACGCCCAAGTCAACCTTCGCACTAC
GCCGATTGCCGATGTGATGACGCGAAACTGTGTCACAATTACTGAAAACGTTTTAGCGGCGCAGGCGCTGCAAGTGATGG
ATTCCAAAAATATCAACGGCCTGATAGTGATAGATAAAGAACATCATCCTGTCGGAGCCCTCAATATGCTCGATATGGTT
AAAGCGGGAGTGATTTAA

Protein sequence :
MVDQSQLRQWGCKVIDIEKSALDNLYQYVDSVEFAQACELILNCTGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG
EASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAIPVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSST
TATLVMGDAIAIALLQAKGFTREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAVID
EQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNINGLIVIDKEHHPVGALNMLDMV
KAGVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-55 43
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-55 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-55 43