Gene Information

Name : Shewana3_0637 (Shewana3_0637)
Accession : YP_868281.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 751123 - 751734 bp
Length : 612 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: vfi:VFA0103 two component response regulator

DNA sequence : 
ATGAGCCACGCATTGCCCGTGTATTTAATCGATGATGATGAGTCGGTGCGCCGCTCGCTGCGGTTTATGCTCGAAAGTTA
TGGCTTGAATATCCGCGACTTTGATAGCGCCGAGGCGTTTTTTGCCGCCATCGACTTAAGCCAGCCGGGTTGCGCCTTAG
TCGATGTGCGTATGCCGGGCTTAAGTGGGCCGCAATTACATGCGCAATTAGTGCAGCACAATAGTCCGTTGGCGGTGATT
TATTTGACTGGCCATGGCGATGTGCCCATGGCGGTGGAGGCGCTAAAACTCGGGGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGTGCCAAGTTGGCCGACGCAGTCGTTAAAGCGCTAGAGCATGCCAAGGCGCATTATCAAGATAATCAATATCTTC
AGACTTATCAGACTCTCACACCGCGGGAGCGGGAAATCCTTACCCTTATCGCCAAAGGCTATAAGAATCAGGAGATCGCC
GATACGCTGTGCATCGCCATGCGTACGGTCGAAATTCACCGTGCGAACTTAATGAAAGGCATGCAGGTCGGCTCGCTCGC
CGAGATGATATTAATCTACGGCCGGATTGTCGATCGCCTTGCCCCCACATAA

Protein sequence : 
MSHALPVYLIDDDESVRRSLRFMLESYGLNIRDFDSAEAFFAAIDLSQPGCALVDVRMPGLSGPQLHAQLVQHNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLADAVVKALEHAKAHYQDNQYLQTYQTLTPREREILTLIAKGYKNQEIA
DTLCIAMRTVEIHRANLMKGMQVGSLAEMILIYGRIVDRLAPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-37 47
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-37 47
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-37 47
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-37 47
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-37 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_0637 YP_868281.1 two component LuxR family transcriptional regulator VFG0488 Protein 7e-38 47