Gene Information

Name : Shewana3_0633 (Shewana3_0633)
Accession : YP_868277.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : molydopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 743874 - 746981 bp
Length : 3108 bp
Strand : -
Note : PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppr:PBPRB0003 putative tetrathionate reductase, subunit A

DNA sequence :
ATGGATAAGAGTAAACGTCGTTTTATCAAAGGCGCAGCTGTGACGGGTGGCGTGGGATTATTTGCCGCAGGTTACAGCCA
TACCTTAGCGCAAATGGGCAAGGGGGTGGTGAATGGCAGTTCGGGCAAGACCACCCAAGATCCCATCCATGGCAATTCGC
TAGCCCCTGAATATAAAGTGGATTTAACCTCAGGCCAGCTGATTGGCAACGATGAGCAACGCATCGCCAATACCATGTGT
CTCGGCTGTTGGACCAAGTGTGGCGTGCGCGCCCGTATCGATAATAAGACCGATAAGATCCTCCGCATCAGCGGCAATCC
CTATCATCCGCTCTCGGCGCGGGAACATATCGACTTCGATACGCCGATCAAAACCGCCTTTGTGGGCTTGAGTGCCTATC
AGGAGCAGGGCTTACAGGGACGCTCAACCGCCTGCGCTCGTGGTAATGCCATGTTAGAACAATTAGATAGTCCCTATCGC
GTCACCCAATGCCTTAAACGGGTCGGGCCGCGTGGTAGTGGTCAATGGCAAAGCATCAGTTTCGAGCAACTGCTGACCGA
GGTCGTCGATGGCGGTGACTTATTTGGCGAAGGCCAAGTCGAAGGCTTAAGAGCCATTCGCGATATCAGCACACCACTCG
ATGCCAATAATCCTGAATATGGCCCCAAGGCTAACCAGCTATTGGTGTCGAACGCTTCGGATGAGGGCCGCGATGTCATC
ATTAAACGCTTTACCTTCAATAGTTTCGGTACACGAAATTTTGCCAACCACGGCGCCTATTGCGGCTTTACCTATCGCGC
AGGTGCGGGTGCCCTGCTCGACGATTTAAAGAAATACGCTCACCTTAAACCCGATTGGGACAATAGCGAGTTTCTGCTGT
TTATCGGTACCTCGCCGCAGCAATCGGGCAATCCTTTTAAACGCCAAGCGCGGCAGTTGGCCAACGCTCGGGTCGATGGG
CGAGAATTCAGTTATGTGGTGGTGTCGCCCATGTTGCCCAACACCTCGAACCAACCCTGCGCGGGTAACAATACTTGGCT
GCCCATTCGCCCCGCAACCGACTCCGCCCTTGCCATGGGCATGCTGCGCTGGATTATCGATAACCAGCGCTATGCCAGTG
CATTTTTAACCGCGCCCAATGTCGAGGCGGCGAAAGCTGCGGGTTATCGAGGCTTTAGTAATGCCAGCTTCTTAATCATC
AGCACGCCAAATCACCCCAGATACGGCCAATATTTGTATGCCAGTGATCTCGGCCTGCCCTTCGAAGGTAAAGCTTACGG
CGAGCAAGACTCACCTCTGGTTGTCGATGCCGCTACTGGGCAGATCCTACCCGCCGGACAATGCGCCAAGGCGCAACTTG
AGGTGGAGCAAAGCGTGAATACGCCAAAGGGCGATCTGAGGGTGAAATCGAGTTTTCAACTGCTCAGTGAAGCCGCGCGC
AGCGTCGAGATGGCGGACTATGCCAAGGAGTGCGATATTAGCGAGGCGCAAATTGCCGCCCTCGCCCACAAATTCACGGA
TCACGGCACTAAGGCGGCGGTGATTTCCCACGGCGGCACTATGAGCGCCAACGGTTTTTACAGCGCATGGGCGATCATGA
TGCTTAACGCCATGATTGGTAACCTAAATCTTAAGGGCGGCGCAATGGCTAAGGGCGGTACTTTCCCCGCCTTTGGGGCT
GGCCCAAGGTACAATTTGCAGGAGTTTGACGGCATGGTCGAACCTAAGGGCGTATTCCTTTCCCGCTCTAAGTTCCCCTA
CGAGAAAACCTCTGAATACCGCCGTAAAGTCGAGGCGGGTGAGTCGCCCTATCCGTCAAAGGAGCCTTGGTTCCCCATCT
CATCGCCCCTGCTCGGTGAGCATTTGACTGCGGCGGTGCACGGTTATCCCTATCAACTCAAGGCGTGGATCAACCATATG
GGTAACCCGATTTATGGTCAGGCGGGTCTCGGCGAAGCTATTGGTGCACAATTAAAAGACCCCAAAGTATTGCCGCTATT
TATCAGCATCGACAGCTTTATCAATGAGACCTCGGCGCTGTCGGACTACATAGTGCCCGACACTTTAACCTATGAATCTT
GGGGCTGGAGCGCCGCGTGGCACGGCACGCTCACTAAAGAAGCCACCGGGCGCTGGCCGATTGTCGAGCCGAGGGTCGCC
AAAACCGCCGATGGCGATGTGATTTGTATGGAATCCTTCCTTAGCCAAGTGGCGATAAAGCTCAATCTGCCCGGCTTTGG
CGCCAATGTGGTCAAGGCCGCAGATGGCAGTTTGCATCCCCTGATCCGCGCGGCCGATTTCTCGCTCTACGGCGCGGCGA
ACGTGGCCTACCTTGGAAAACCCGTTGCCGATATCAATGCCGAAGATATGTACTTCAGTGGTGTTGGGCGCATTCAAGCG
GAACTCAATGCCAGACTCAAACCCGAAGAGGTCAAAAAAGTCAGTTACTTATTTGCCCGTGGCGGCCGCTTTGAGAATAT
CAGCGCGGGACGCGATGAGGCGGGCAACCCCAGCAAGGTTTGGCCAAAACCTTTAATGCTGTGGAACCCAGAGGTCGGCA
GTCGGCGCAATAGCTTAAGCGGTGAATATATGAGCGGCTGTCCACGGCGTTATCATCCTGCGCTCGCCAACGGCACACCC
TTGGAGCAAGCATTCAATAAGTCACAGTGGCCGCTGCTGATCAGCAGTTATAAGTCGCATACCATGAGTTCGATGAGCAT
AGGTTCGGATCGTTTGCGCCAAGTGCACCCCAATAATCCGGTGCGCATCAATGAGCAAACCGCCGCACGCCTTGGCATCA
AGACCGGAGATACGGTCAAGATCAGCACGCCAAATGGCAGTGTGGTGGCCTTGGTGGAATGTGTGGCGGGCGTGCATCCC
GACTGCATTGCCATCGAGCACGGTTATGGCCATAAGGAGTTAGGCGCGCGGGACATAGTCATCGATGATAAAAAGATTGC
CGCCAATCCGCTGATCCGCGTCGGAGTCAATATGAACGACTTGAATCTGTTCGACCCAAGCCGCCATGGGCGCTATCCGC
TGGTGGACTGGGCCAGCGGTGCATCGGCGCGGCAAGGACTGCCCGCCAAGATAGAGAAAATCGCTTAA

Protein sequence :
MDKSKRRFIKGAAVTGGVGLFAAGYSHTLAQMGKGVVNGSSGKTTQDPIHGNSLAPEYKVDLTSGQLIGNDEQRIANTMC
LGCWTKCGVRARIDNKTDKILRISGNPYHPLSAREHIDFDTPIKTAFVGLSAYQEQGLQGRSTACARGNAMLEQLDSPYR
VTQCLKRVGPRGSGQWQSISFEQLLTEVVDGGDLFGEGQVEGLRAIRDISTPLDANNPEYGPKANQLLVSNASDEGRDVI
IKRFTFNSFGTRNFANHGAYCGFTYRAGAGALLDDLKKYAHLKPDWDNSEFLLFIGTSPQQSGNPFKRQARQLANARVDG
REFSYVVVSPMLPNTSNQPCAGNNTWLPIRPATDSALAMGMLRWIIDNQRYASAFLTAPNVEAAKAAGYRGFSNASFLII
STPNHPRYGQYLYASDLGLPFEGKAYGEQDSPLVVDAATGQILPAGQCAKAQLEVEQSVNTPKGDLRVKSSFQLLSEAAR
SVEMADYAKECDISEAQIAALAHKFTDHGTKAAVISHGGTMSANGFYSAWAIMMLNAMIGNLNLKGGAMAKGGTFPAFGA
GPRYNLQEFDGMVEPKGVFLSRSKFPYEKTSEYRRKVEAGESPYPSKEPWFPISSPLLGEHLTAAVHGYPYQLKAWINHM
GNPIYGQAGLGEAIGAQLKDPKVLPLFISIDSFINETSALSDYIVPDTLTYESWGWSAAWHGTLTKEATGRWPIVEPRVA
KTADGDVICMESFLSQVAIKLNLPGFGANVVKAADGSLHPLIRAADFSLYGAANVAYLGKPVADINAEDMYFSGVGRIQA
ELNARLKPEEVKKVSYLFARGGRFENISAGRDEAGNPSKVWPKPLMLWNPEVGSRRNSLSGEYMSGCPRRYHPALANGTP
LEQAFNKSQWPLLISSYKSHTMSSMSIGSDRLRQVHPNNPVRINEQTAARLGIKTGDTVKISTPNGSVVALVECVAGVHP
DCIAIEHGYGHKELGARDIVIDDKKIAANPLIRVGVNMNDLNLFDPSRHGRYPLVDWASGASARQGLPAKIEKIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 50
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 50
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 49
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_0633 YP_868277.1 molydopterin dinucleotide-binding region VFG0484 Protein 0.0 50