Gene Information

Name : Shewana3_4088 (Shewana3_4088)
Accession : YP_871711.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : phosphoglycerate mutase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 5.4.2.1
Position : 4910795 - 4912024 bp
Length : 1230 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase

DNA sequence :
ATGACATATTCTAATGCCGCAGAAAATGCTAGTTTGAGAAACAAAATGCCAAACTGTATAAAACCTATGAACATAGTGGT
AGTTGGAATGGGCTATGTTGGCCTATCGAACGCGGTTTTACTCGCCCAGCAAAACCATGTAGTAGCGATTGATTTGATGC
CCGAGCGCATCGCGTTAGTTAATGCGCGTAAACCAACGGTCGCCGACAGTCTGATTGAAGAATACCTGCAGCATAAAGCC
TTAAATCTCAGTGCCACGAGCGACAAAAACGTCGTTAAAGAAGCCGATTTTGTCATCATAGCCACTCCTACGGATTACGA
CCCACAAACCAACTACTTTAATACTCAGTCGGTCGAACGGGTGGCGAAGGAAGTGCTCGCCCTGAATCCTGACACCACCA
TTGTCATCAAATCGACTGTGCCAGTGGGTTTTACCGAAGGGCTGAGAAGTAAACTCAACAGTGACAATATCTTATTTTCG
CCTGAGTTTTTGCGCGAAGGTAAGGCGCTTTACGATAACCTGCACCCCTCGCGGATCATAGTGGGTGAACGTTCCGAGCG
CGCCCAAGCCTTTGCCGATCTGCTTGCTCGCGCCGCCATTAAACAAGATATTCCGATTTTACTCACAGACAGCACTGAGG
CAGAGGCGATTAAGTTGTTTGCCAACACCTTTTTAGCCATGCGCGTCGCCTACTTTAATGAGTTGGACACCTATGCGGAG
AGTCGAGGGCTCAACACCCGCCAGATTATCGAAGGCGTATGTTTAGATCCGCGCATCGGCGATTACTATAACAATCCTTC
CTTCGGTTATGGCGGTTACTGCCTGCCCAAGGACACTAAGCAATTGCTGGCCAACTATAACGATGTGCCTAACAATCTCA
TCAGCGCCATTGTCGATTCCAACACGACCCGCAAAGATTTTATCGCCAACGCGATTATCAGTAAGCAACCGAAGCGAGTG
GGGATCTATCGCTTAATCATGAAATCCGACTCAGACAACTTCCGCGCCTCGGCGGTACAAGGAGTGATGAAACGCATAAA
GGCCAAGGGCATCGAAGTCGTGGTCTATGAGCCCGTACTCAAGGAAGGGGAGTTTTTTAACTCGAAAGTGATCCGCGATT
TACATGAATTTAAAGCCATGTGCGATGTAATTATTTCTAACCGTATGGCCAATGAACTCGAAGATGTCGCCGCTAAGGTG
TACACCCGGGATCTGTTTCATCACGACTAA

Protein sequence :
MTYSNAAENASLRNKMPNCIKPMNIVVVGMGYVGLSNAVLLAQQNHVVAIDLMPERIALVNARKPTVADSLIEEYLQHKA
LNLSATSDKNVVKEADFVIIATPTDYDPQTNYFNTQSVERVAKEVLALNPDTTIVIKSTVPVGFTEGLRSKLNSDNILFS
PEFLREGKALYDNLHPSRIIVGERSERAQAFADLLARAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAE
SRGLNTRQIIEGVCLDPRIGDYYNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIANAIISKQPKRV
GIYRLIMKSDSDNFRASAVQGVMKRIKAKGIEVVVYEPVLKEGEFFNSKVIRDLHEFKAMCDVIISNRMANELEDVAAKV
YTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-89 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_4088 YP_871711.1 phosphoglycerate mutase VFG0963 Protein 2e-94 54