Gene Information

Name : hemC (Shewana3_0386)
Accession : YP_868035.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 446502 - 447434 bp
Length : 933 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTCTGAAAACCGCATACGTATCGCTACCCGCAAGAGTCCGCTGGCCATGTGGCAAGCAGAATTTGTTAAAGCAGAATT
AGAACGCGTTCACCCAGGTATCGTGGTGGAGCTATTGCCAATGAGCACTAAGGGCGATGTTATCTTAGACACCCCATTAG
CTAAGGTTGGTGGTAAGGGCCTATTCGTAAAAGAACTCGAAGTCGCCATGCTGGAAGACCAAGCCGATATCGCGGTGCAC
TCGATGAAAGACGTGCCAGTGGATTTCCCCGAAGGCTTAGGACTGGAAGTGATTTGTGAGCGCGAAGATCCGCGCGACGC
CTTTGTGTCTAACCTTTATAAGTCAATCAGTGAGTTGCCACTTGGCGCCACAGTCGGCACCTCAAGCCTACGTCGTCAGT
GCCAGCTGCGCGCCTCACGCCCAGACCTGATTATCAAAGATCTGCGTGGCAACGTCGGTACTCGCCTCGCGAAACTCGAT
AACGGCGAATACGATGCGATTATCCTGGCTGCTGCAGGTTTAATCCGCCTGAAATTGTCTGAGCGTATCGCCAGCTTTAT
CTCTGCGGAAGAATCCTTACCCGCCAACGGACAAGGCGCTGTCGGTATCGAGTGCCGCACTAACGATGAACGCGTAAAAG
CACTCCTAGCACCTTTAGAACACTTAGAGACTCGCTACCGCGTGATCGCCGAGCGCGCCATGAATACTCGCCTCGAAGGC
GGCTGCCAAGTACCTATTGGTGCCTTTGCCGAAATCCACGGTGATGAGATGACACTGCGCGGCCTCGTAGGTAACCCAGA
TGGTAGCGAAATCATCGAAGGCGTGATTACAGGTCCAAAGACCGAAGCAACGAAACTCGGTGTGGCCCTGGCTGAAGAAC
TACTCAGCAAAGGCGCCAAAAGCATCCTCGACGCTGTTTACGCAAAAGCCTAA

Protein sequence :
MSENRIRIATRKSPLAMWQAEFVKAELERVHPGIVVELLPMSTKGDVILDTPLAKVGGKGLFVKELEVAMLEDQADIAVH
SMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLD
NGEYDAIILAAAGLIRLKLSERIASFISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEG
GCQVPIGAFAEIHGDEMTLRGLVGNPDGSEIIEGVITGPKTEATKLGVALAEELLSKGAKSILDAVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-72 59
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-72 59