Gene Information

Name : Shewana3_3859 (Shewana3_3859)
Accession : YP_871483.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1396
EC number : -
Position : 4636213 - 4636524 bp
Length : 312 bp
Strand : -
Note : PFAM: helix-turn-helix domain protein; KEGG: ppr:PBPRA1807 putative transcriptional regulator

DNA sequence :
GTGGCCGATAAAATTATCAATCCATTACCTCTCAGGCTCAAACAAGCTCGCACTGCTAAGGGGATTAGTCAAAAACAGCT
GGGCATCCAGCTAGGTATGGAAGTGGGCACTGCGAGTGCGCGTATGAATCAGTACGAAAAAGGCAAGCATACACCTGACT
ACCAGACTTTAAAGGCTATCGCTGATGAATTAGGCGTGCCAGTTGCTTACTTTTTTTGTGAGTCGGAAAGCACGGCTAAA
TTGCTATGTTTACTTGAAAAAATGACAGAAGAAGAAAAGTCTAATTTGATAGAGCAAATCACAAAATCATAA

Protein sequence :
MADKIINPLPLRLKQARTAKGISQKQLGIQLGMEVGTASARMNQYEKGKHTPDYQTLKAIADELGVPVAYFFCESESTAK
LLCLLEKMTEEEKSNLIEQITKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0176 NP_229833.1 transcriptional regulator Not tested VSP-1 Protein 1e-26 62
BCAM0258 YP_002232888.1 repressor protein Not tested BcenGI11 Protein 3e-11 43