|
Name : Shewana3_3849 (Shewana3_3849) Accession : YP_871473.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Resistance Product : acriflavin resistance protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 4619966 - 4622995 bp Length : 3030 bp Strand : + Note : PFAM: acriflavin resistance protein; KEGG: sru:SRU_0085 transporter, AcrB/D/F family DNA sequence : ATGAGTATTGCATCAGTTGCTATCAATAATAGGGTAGTTACGCTTGTTTTGACTGTAGTTATGCTTATTGCTGGCTTATA CATTTTTAATGGGATGAGCCGATTAGAAGATCCCGAATTCACGATAAAAGATGCATTAATAATTACTCCCTACAATGGAG CTTCAGCATTAGAAGTTGAGCAAGAAGTAACTGAGTTGCTCGAAAAAACTGTTCAACAATTGGGTGAGCTAGATAAGGTA ACATCAAAATCCGAACGAGGCTTATCAACTATTACAGTAACAATAAAAGAACAATATAATAAGGAAACTTTGCCACAAGT ATGGAATAAGCTAAGGCAAAAAATAGATGATGTAAAATACTATTTACCACCAGGTGCTGGTCCATCTTTAGTGATCGATG ATTATGGTGATGTCTATAGCATTTTTATGGTAGTTAGCGGCGATGGATACAGTTTTAAGGAATTAAAAACATACGTAAAC GATCTGCAGCAACAATTACTTTTAGTAAATGGCGTAGGGAAAATAACAACTTTCGGCGAAAAGAGCGAAGCAATCTATAT TGAGTTTAATCGCTCTCGCATGGCTCAGTTAGGTATATCACCAGAAATAGTAGCCGCTCAATTGAACGGTAAGGGGTTGG TAGTTGATGCTGGCAGAGCACATGTCGGAAGTTCTAGCATCGCCGTTTCCACAACAGGTGGTTTCACAAAAGTTAGCGAT TTCGAAAAGTTACTTATTACTCACGATACAAAACAGTTTTACCTAAGCGACATAGCTAAAGTTAGCAGAGGCTACGTTTC CCCAAGTACACAGTTAATTAACTTTGATGGTAAGGCCGGAATCGGCTTGGGAATATCAACAGTATCAGGTGGAAATACTG TTGATATGGGTGAAGCTGTTTTAGCAAAACTATCTGAATTAGAAAGCCAACGACCTGCAGGAATAGAGTTTGGCTATGTT TCATTACAATCTGAAGGTGTTAAAGAGGCCATTTCCGGTTTTACATCAAGCTTAGCTGAAGCTGTTATTATTGTTATAGT GGTTTTACTTTTCTTTATGGGTTTGAGAAGTGGCCTTCTTATAGGATTTGTATTAATTTTAACCATCGCAGGATCGTTCA TATTCCTTGCCCCCATGGGAGTAGCATTAGAACGCATTTCTCTTGGCGCATTAATTATTGCACTGGGTATGTTAGTTGAT AATGCGATTGTTGTGGTCGATGGCATTTTGATAAGAATGCAAAAAGGCGAAAGTGCAGAAAGTGCGGCACCTAGAGTTGT AAATCAATCAGCTTGGCCTTTACTAGGAGCGACATTAATTGCAATCCTAGCTTTTGCAGCTATTGGCACCTCAAATGATG CTACTGGTGAGTATTGTCGCTCATTATTCCAGGTTGTAATGGTATCTCTGTTATTGAGCTGGGTAACAGCAGTAACTATT ACCCCACTTCTATGTGTAATGTACTTAAAAGCGCCTAAAAGTACTGATAAGACCTCACCATATCAAGGAACATTTTATAC AAAATACAGAGGCTTATTAGCATCTAGTATCCGACATAGATACTTAAGTTCAGCATCAATTATTGGCATTTTTGCTCTGT CATTATGGGGGTTCTCGTTTGTTCAGCAGAACTTTTTCCCCAGCTCAACTAGGGCACAATTTATGGTTGATTTCTGGTTG CCACAAGGAACACACATAGAAGAAACCCAGAAACATGCTGAATCAGTTGAAAATTACTTAGGAAATCTAGCAAATGTTGA GCACGTTACTACAACCATTGGTGAAGGTGCATTGCGATTTCTACTTACCTACCAGCCTCAGCAATCCAATAGCAGCTATG CGCAATTTTTAGTAGATGTAGACGATTACACGGTAATCAAAACACTAATACCTAAAATTGAAGTCGAGCTTTTACAAAAA TATCCTGATGCTCTTGTTTATGCCTCACCTTTTGAGTTAGGGACTGGTACAGCTGGTAAAATCCAAGCAAGGATCAGTGG ACCTGATACGGATGTTCTAAGAGAAACATCTGATAAAGTTCTTGAAGTATTCTCTAAAGAAAGCAATACCAAAGGAGTCA GAACTGACTGGCGAAACAAACAGCTTTACATAGAGGCTGTTCTTGCTGAAGAACAAGCAAATATAAATGGAATTAATAGA GGAATGGTTGCAGAAGCCATTAAGGAATCATTTGAAGGAGTAACTACCGGAGTATATAGAGAAAATGATTTACTACTGCC AATTATTATACGAGCTAATGAAAATGAACGTTCAGATATTACAAATATAGAGAATGTGCAAATTTGGAGTCCCAATGCAC AAAAAATGATCCCCCTAAGACAAGTTGTTCAAAGTTTTGAAACAAAGTTTGAAGATGGTTTAATTCTTAGAAGAAATAGG GAACGAACTATCACAATTTTTGCTGATCCGGTTACCGGCACAGCTTCAGAATTGTTGGCGACATTAAAACCACAAGTAGA AGCTATTAAAATACCACCAGGATACACTTTGGAATGGGGGGGAGAATATGAAGACTCAAGTAAAGCGGAGAAGGGACTAG CCTCGAGTATCCCGATATTCATCTTATCGATGATATTAATAACTATAGTAATCTTTAACTCGTTAAAACAAACATTAGTT ATTTGGTTATGTGTACCTCTGGCTTTAATCGGTGTAACAGCAGGTATGCTAGCAACTAATCAACCATTTGGATTTATGGC ATTACTAGGATTTTTAAGCCTCATTGGCATGCTTATAAAGAATGCTATTGTTCTTGTTGATGAAATTAATCTAGAACAAA GTCAAGGTAAATCACTTATAAACTCCATATTAGATTCCGGAGTAAGCAGGCTACGTCCAGTTGCGATGGCGGCTCTTACT ACTGCATTAGGTATGATTCCGCTTATTTTTGATGCATTTTTTGTTTCAATGGCAGTTACCATAATTTCTGGTTTAATGTT TGCTACCGCTCTAACAATGATCGTATTACCAATAGTATATGCACTAATATTTAAAGCTGAAAATCCTTAG Protein sequence : MSIASVAINNRVVTLVLTVVMLIAGLYIFNGMSRLEDPEFTIKDALIITPYNGASALEVEQEVTELLEKTVQQLGELDKV TSKSERGLSTITVTIKEQYNKETLPQVWNKLRQKIDDVKYYLPPGAGPSLVIDDYGDVYSIFMVVSGDGYSFKELKTYVN DLQQQLLLVNGVGKITTFGEKSEAIYIEFNRSRMAQLGISPEIVAAQLNGKGLVVDAGRAHVGSSSIAVSTTGGFTKVSD FEKLLITHDTKQFYLSDIAKVSRGYVSPSTQLINFDGKAGIGLGISTVSGGNTVDMGEAVLAKLSELESQRPAGIEFGYV SLQSEGVKEAISGFTSSLAEAVIIVIVVLLFFMGLRSGLLIGFVLILTIAGSFIFLAPMGVALERISLGALIIALGMLVD NAIVVVDGILIRMQKGESAESAAPRVVNQSAWPLLGATLIAILAFAAIGTSNDATGEYCRSLFQVVMVSLLLSWVTAVTI TPLLCVMYLKAPKSTDKTSPYQGTFYTKYRGLLASSIRHRYLSSASIIGIFALSLWGFSFVQQNFFPSSTRAQFMVDFWL PQGTHIEETQKHAESVENYLGNLANVEHVTTTIGEGALRFLLTYQPQQSNSSYAQFLVDVDDYTVIKTLIPKIEVELLQK YPDALVYASPFELGTGTAGKIQARISGPDTDVLRETSDKVLEVFSKESNTKGVRTDWRNKQLYIEAVLAEEQANINGINR GMVAEAIKESFEGVTTGVYRENDLLLPIIIRANENERSDITNIENVQIWSPNAQKMIPLRQVVQSFETKFEDGLILRRNR ERTITIFADPVTGTASELLATLKPQVEAIKIPPGYTLEWGGEYEDSSKAEKGLASSIPIFILSMILITIVIFNSLKQTLV IWLCVPLALIGVTAGMLATNQPFGFMALLGFLSLIGMLIKNAIVLVDEINLEQSQGKSLINSILDSGVSRLRPVAMAALT TALGMIPLIFDAFFVSMAVTIISGLMFATALTMIVLPIVYALIFKAENP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewana3_3849 | YP_871473.1 | acriflavin resistance protein | BAC0428 | Protein | 0.0 | 49 |
| Shewana3_3849 | YP_871473.1 | acriflavin resistance protein | BAC0519 | Protein | 0.0 | 48 |
| Shewana3_3849 | YP_871473.1 | acriflavin resistance protein | BAC0425 | Protein | 0.0 | 45 |
| Shewana3_3849 | YP_871473.1 | acriflavin resistance protein | BAC0526 | Protein | 0.0 | 45 |
