|
Name : Shewana3_3788 (Shewana3_3788) Accession : YP_871412.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Unknown Product : SNF2-like protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 4549096 - 4552542 bp Length : 3447 bp Strand : + Note : PFAM: SNF2-related protein; helicase domain protein; restriction endonuclease; SMART: DEAD/DEAH box helicase domain protein; KEGG: vch:VC1760 helicase, putative DNA sequence : ATGAAAAACTGGATTTCATCCTTATTTAGCAGCCGCAATACTAAGTTCAAATTTTCTTATGACATCACTAAAAACAGCAT TGATTTCTATTGCCCAGAAAAGCAGTTTCAAGACATAAAGAAAGGCGATGCTGATGATTTTCTAACAGCACAATACATTG CTTTGCAAATGTTGGCTGAAGAGGGAAGCGCTGAAAGTATTCCAAACGGCTTCATAGTTAAACATCAAGTCATTGCAGCA CTAGATGAAGATGTCCATCAGCTATTGAACTTACCCGAAATATGGAACGGACAAGCGAATGTCGATATCAGAGGTACGAC ATTCGAAGGTTCCTTCGACGTAACAATACACGTTGATGCACCATCAGGACGAATGACCTCAGCTTACCAAGTAGATGGGA GTATTATTTCTTTCGGTAACGCTCAATTCACCTTAAAAAAAGTGATGTTTGATGTGTTCTCCGCATTAAAATTTCATAAA GAGTCATCGAAAAATGAGTCAGAGAACCTTCTGTTGTTGCACACGTTTCAGCAAGCTCAGCGCGCTGGGGCGAAGTTATC GTTAAACCACTTCAACAAGTTAGATATTCACGTCCCCGATAAAATCACAGTTGAAGCAGAACTTGATAGTGTTGGTAATT TAATCCTTACGCCCCAAATGGGGCAAAAAGCAGATCACGACTCGCTACAACGTGTTTTAGGCCAAATTCAGTCAGAGAGA GGGCGAACTCTCAAAGTGGGCAATGAAATAATTCTCTTCAATGAAAAAACGGCTAAAGCCGCAAAAGAGATTATCAGTAA TAGAACAATTCCAAAATCTCAGGTTAAGAACTTTTTAGAGGCTCCCGGTGCATACCTTGACGCATCTTTAATCGACTTAG ATGTTGGTTTTTCCTTACGAGTGAAAGGTGCTACTCGTTTCAAACACGCATATTTTGGGGAAACAGACGAGTCAGGGATT GATTGGTTTGGACAGAGTCAAGCTTCCTCTCAGATCTTGCCTATAAGCTCAGTCATCAAGGAGATAAAAACTGACGATGA CCGATTACAACTTACTAAAATTCTTAATGATGCTAAAGCAACTGGGGCCACTGAGGTTAAATTTGAAGGGAAAAACTACG ACATTGGAAGCGACAGCGAAGTATATGAAGTACTAAAAAAAATAGAACAAAAACTTATACAGCAAGAAAATACGGAAACC GATGAGGGAAGAGACAATACTGAGGCTCCCGGACCTCAAGAGAGCGATGACAGCCCTATAGTCATCGACATTGCCCTTAA TGATGAGGAGTTAGATAGCCCGTCTAAGTTAGTTGAAGAAGAGCTTAATAACGTACTTTATAGCCAAGGAATTAGCTGGG ATAACTATAGAAGAGAACCATTTCCTCATCAAATAATCGGAGTTAAGTGGATACTCGGCTTAGAGGAAATCGCACGAAGC AAAGAACTGGTTAATGGCGCCCTACTAGCCGACGATATGGGGTTAGGCAAAACCTTTATGTCTCTAGCAGCCATTGAACA ATATTACTGTATATGTGAAGAGAACGGTGATGTATGCCGTCCTACGCTGATCGTTGCACCACTCAGTTTGCTAGAAAACT GGAAGGATGAAGTCGCAGAAACATTTCACAAGTCCCCTTTCAAAGACATTGTCATCTTACAATCGGACGGAGAGCTCAAT AGCTTTCGAGATGGCGGGATAGAGACCAAAGCGTCGAATATTGATGATGAGTCATTTAAGCCTAGATACTCTCTTAAATT CGGTGAGCAGCATGGGGCTGCTCGTTTAGATTTGCCCTGCCGTCTAGTCATAACTACCTATCAAACACTTAGGGACTATC AATTCTCGCTGTCTCAAATAGATTGGGGGATCGTCGTGTTTGATGAGGCTCAAAACATCAAAAACCCTAACGCATTGCAA ACTCGAGCAGCTAAAGGTTTAAAAGCTCGGTTCAAGTTATTAGCAACAGGTACACCTGTTGAAAATAGTCTAGCTGACTT TTGGTGTCTAATGGATACAGCCTGTCCCGGCTTTCTCGACTCCTATCAATCTTTCAGACACACCTATATATCTCCAATCC TTCAAGCGGCTGGCGATGAAATAGAGTCGGTCAGAGCAAGTTTGGGCAGGAAGTTACGTGAAAAAGTAGGCGCCTTAATG CTTCGTCGCGTTAAAGAAGACAACTTAGAAAGGCTTCCCAAAAAGAATATGTTTGTAGGGCTGGAACCTACCGAATGGCA GTACGAGCCTAAACTGCATTCGATTATGGATTCCTATCAGCAAAAGGTTTATGAAGGTTCTATTGAATCCCAACTAGAAA ATGAAGAAAGTCATGTTCTTACAACACTAATGCGTATGAGAGATACTTCTCTCCACCCACGTTTGGCTGATGGTGGACGC TTAGATGCACCAAGTTCAAAAAATGATTTAAAACAGATATTTGCAGAATCAGCCAAACTTAAAAAAATGATCGAGGTGTT AACAGATATTCAATCAAGACGTGAAAAGTGTATTATTTTTGCGATAAATAAAAGACTACAGCGTTTTCTGAGTATCGCCT TGGGCAATTACTTTGGACTAGGTCCTTTGCATGTAATTAACGGTGACACCAAGGCCGTAGTAAAAAATAAGAATACAGCG AACCGTAAATCAATGATTGCTGAGTTTGAAGCGAAAGAAGGATTCAACCTCATCATTTTCTCACCGGTAGCAGCTGGCGT TGGCTTAACAGTAGTTGGAGCCAATAACGTAGTTCACTTTGAGCGCCACTGGAATCCAGCAAAAGAAGCTCAAGCAACCG ATCGTGTTTATAGAATCGGTCAGACGAAAGATGTGAATGTCTATGTGCCTATTCTCCATCACCCAACTATCGAATCCTTT GATGTGAATTTACACCGATTACTATCCCAAAAATCCATGTTGAAAGATGCCGTTGTAACTCAGGGCGAAGTTATGCCCAA CCCTGCTGGTGCAGACAAACATCAACTTACAGCCGATAGTATTATCAATTCAGAAGATATACCGCGTTTGAGCTGGAAAC AGTTTGAAGCTTTTTGTGTGGAACTTCTTTCCAAGGAATTCAACGCTGACAGTGCTTGGCTTACGAAAGAAGGACCAGAT TTTGGTGCAGATGGCTTGCTGATTAGTGGCCAAGAAGCCATTTTATTACAAGCAAAACATAAGCAGGGTTCTTACAAAGG GCATAATGCCGTTCAAGAGATCTCTAACGCTAAAGCGATGTATGGTAAACATCTCGGACGGCCTATAGGTAAACAAATAT TCATAACCAATGCTACGCAGTTAGCTAAGTCAACGAGAGAAATTGCCCAAGAGTTATCAGTGATAATTATTGATGGCAAT GATCTATCAGACCTTTGCCAATGTCACCGAATAAGCTTTGCTCAAGTTCTTAACCGCCTATCCAAACAACGATATGTAGT TCGTTAG Protein sequence : MKNWISSLFSSRNTKFKFSYDITKNSIDFYCPEKQFQDIKKGDADDFLTAQYIALQMLAEEGSAESIPNGFIVKHQVIAA LDEDVHQLLNLPEIWNGQANVDIRGTTFEGSFDVTIHVDAPSGRMTSAYQVDGSIISFGNAQFTLKKVMFDVFSALKFHK ESSKNESENLLLLHTFQQAQRAGAKLSLNHFNKLDIHVPDKITVEAELDSVGNLILTPQMGQKADHDSLQRVLGQIQSER GRTLKVGNEIILFNEKTAKAAKEIISNRTIPKSQVKNFLEAPGAYLDASLIDLDVGFSLRVKGATRFKHAYFGETDESGI DWFGQSQASSQILPISSVIKEIKTDDDRLQLTKILNDAKATGATEVKFEGKNYDIGSDSEVYEVLKKIEQKLIQQENTET DEGRDNTEAPGPQESDDSPIVIDIALNDEELDSPSKLVEEELNNVLYSQGISWDNYRREPFPHQIIGVKWILGLEEIARS KELVNGALLADDMGLGKTFMSLAAIEQYYCICEENGDVCRPTLIVAPLSLLENWKDEVAETFHKSPFKDIVILQSDGELN SFRDGGIETKASNIDDESFKPRYSLKFGEQHGAARLDLPCRLVITTYQTLRDYQFSLSQIDWGIVVFDEAQNIKNPNALQ TRAAKGLKARFKLLATGTPVENSLADFWCLMDTACPGFLDSYQSFRHTYISPILQAAGDEIESVRASLGRKLREKVGALM LRRVKEDNLERLPKKNMFVGLEPTEWQYEPKLHSIMDSYQQKVYEGSIESQLENEESHVLTTLMRMRDTSLHPRLADGGR LDAPSSKNDLKQIFAESAKLKKMIEVLTDIQSRREKCIIFAINKRLQRFLSIALGNYFGLGPLHVINGDTKAVVKNKNTA NRKSMIAEFEAKEGFNLIIFSPVAAGVGLTVVGANNVVHFERHWNPAKEAQATDRVYRIGQTKDVNVYVPILHHPTIESF DVNLHRLLSQKSMLKDAVVTQGEVMPNPAGADKHQLTADSIINSEDIPRLSWKQFEAFCVELLSKEFNADSAWLTKEGPD FGADGLLISGQEAILLQAKHKQGSYKGHNAVQEISNAKAMYGKHLGRPIGKQIFITNATQLAKSTREIAQELSVIIIDGN DLSDLCQCHRISFAQVLNRLSKQRYVVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0006c | ACA01823.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 58 |
| VC0395_A1359 | YP_001217302.1 | hypothetical protein | Not tested | VPI-2 | Protein | 0.0 | 56 |
