Gene Information

Name : Shewana3_3785 (Shewana3_3785)
Accession : YP_871409.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4544823 - 4546913 bp
Length : 2091 bp
Strand : +
Note : KEGG: vch:VC1764 hypothetical protein

DNA sequence :
ATGGCAACAGAAAGACAAATTGAACTTTCTTGGCTTTTACCAGATTTTTCTCATCTAAGTTTTCATCCTCAAACTGGAAC
GGCTTTAAGCAGTTTATTTGTCGCAATAACCTTGACCGTAACATTACTTTTCATAGCTTACCTGCTCTACAAAAGCATTG
ATGTTGTATTAAAAATCAATTGGTTGCAGAAAGCGTTAGAGCCTTTAGAGAGAAAGGATGTTGCTCAAAAGAAGGAGGTG
CTCTATCAGTTAGCAAAGTCAAAGAGTAAAGGGAAAAGTAAAGGAATTGGCTTTTTATGGATGGAATTTGATGAAACTCT
TGTCGAAGTTCGAAAGGGCGATCAAATTGAAATTCGCAATACTTTAGATGCAGGACATTTTTTCAATACTTACACTCTAG
CTAATAGCGTAACAGAAAATCGTCTAATCGCAGCAGTGCCCGGTTTTCTTACAGCACTAGGGGTCATAGGCACGTTTATG
GGCCTACAACTAGGCTTGGCAGATCTTAAACTCGGTGCAGGTGTTGATGTAACCACAATGCAAGATGGCGTTGCTGGTGT
TGTAAATGGGGCTAAAATCGCATTTTTGACATCAGTTTGGGGGGTTGCATTAAGTGTATTTTTTAACTTCTTTGAGAAAT
TATGTGAACAATTCATCCGCTCAAAAATTCGAGAATTAGAGGATAAAGTCGATTTCCTCTTTCCTAGAGTCCGCCCAGAA
GAACAACTTCAAATAATCTCTGAAAATAGCTCTGAATCACGTAATGTCCTTCAAGGACTGGCCGAAAAAATTGGTGAAAA
GATGCAGGAAGCCATGGTTACGGCTACCCAAGGAATCCAATCAAGTCTCGAAAGTAGTTTGAGCAAGATAATGGCCCCTG
CGATTAATAAGCTGGTTGATGAGACATCTCAAGGTAATCAAAAAGCACTAGAAGGACTTCTAGAAAGTTTTATGGACCGC
TTTGGTCAAGCTGGTAACCTACAGAGAAGTGCGCTTGATGATGTCTCAAACAAAGTCAATCAATCTGTAGAAGCAATGCA
GCTAACAATGAGCAACTTTGTAGAACAATTACAAAAATCACAAGCGGAATCGGGTGATAGAGAGAAGGCTCTCATTGCCG
ATATTTCACATCAAGTTAGTAAGTTGTCTTCCCAATCAGAAGACATCCATCAGAAACTAACATCCTATGTTGAAAATCAA
ATAGGCAAGATATCTTCTCAAATGCAAATCAGAGAAGAGGCTTCGGCAAAACGTGACTCAGAATTAGTCAACGTGATTGG
ACAACAGGTCAATGAGCTAGTTAATAACTCCAGAAGGCAGGGTGAACTGCTTACCAGTTTTGTCGAAACTCAACTTAACA
ACCTAACTAAGTCATTTGACGAACGAGATAAGCGGTCAACTGAACTCGAAACTACGCGTAACAATAAAATTGAGAAGCAA
ACCGAAGCGATTGTAAAAATATCTAATGAATTAATAAGCACTGTAGAGAAATCCGTTTCAGAGCAACTTGCTGCAGTAAA
ACATCTCGTATCGCAAGGAGAAACCCTTCAAAACAGTGTTAATGCCTCCGTTGAAGCCGCTGCTCAAGCAACTCAAGCAA
TGAAAGAATCATCAATTGAACTTAGAGTATCAGCTGATCATATGAGAGTTCTGAGTTCCCACGTAAATGACGCTGGCAAT
AAGCTATCTGGAGCCATCAAGTCAGCTGTAGACAGCACAGCTGACTTGGCGAATCAAAATCAAATTTCAGCACAACGGAT
AGAGAATGCCCGTGAATCACTTATGAAAGATGTTTCACGTTTTAGTGAACTTTCAGACCAAATTAAAGCATTGATTACAA
GTGCAAGCAGTACATTCACTGAATTAAAATCAACACAAAGAGACTTTATCGGCAACTTAAAAGAGGAAGTTGAGAGCCTA
AGTCGAAAAATGACAGATATGCTAGAGGAGTATTCTCAACAAGCAAATGGACAAACAGCAGAACACTTAAAAATCTGGTC
CCAATCAGTGACAGATTATTCAACACAAATGAACAGTGCAGTTAAGGCATTGTCTAGTGTCGTGGACGAAATGCAAGTGA
AACTGGGGTAG

Protein sequence :
MATERQIELSWLLPDFSHLSFHPQTGTALSSLFVAITLTVTLLFIAYLLYKSIDVVLKINWLQKALEPLERKDVAQKKEV
LYQLAKSKSKGKSKGIGFLWMEFDETLVEVRKGDQIEIRNTLDAGHFFNTYTLANSVTENRLIAAVPGFLTALGVIGTFM
GLQLGLADLKLGAGVDVTTMQDGVAGVVNGAKIAFLTSVWGVALSVFFNFFEKLCEQFIRSKIRELEDKVDFLFPRVRPE
EQLQIISENSSESRNVLQGLAEKIGEKMQEAMVTATQGIQSSLESSLSKIMAPAINKLVDETSQGNQKALEGLLESFMDR
FGQAGNLQRSALDDVSNKVNQSVEAMQLTMSNFVEQLQKSQAESGDREKALIADISHQVSKLSSQSEDIHQKLTSYVENQ
IGKISSQMQIREEASAKRDSELVNVIGQQVNELVNNSRRQGELLTSFVETQLNNLTKSFDERDKRSTELETTRNNKIEKQ
TEAIVKISNELISTVEKSVSEQLAAVKHLVSQGETLQNSVNASVEAAAQATQAMKESSIELRVSADHMRVLSSHVNDAGN
KLSGAIKSAVDSTADLANQNQISAQRIENARESLMKDVSRFSELSDQIKALITSASSTFTELKSTQRDFIGNLKEEVESL
SRKMTDMLEEYSQQANGQTAEHLKIWSQSVTDYSTQMNSAVKALSSVVDEMQVKLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1764 NP_231399.1 hypothetical protein Not tested VPI-2 Protein 3e-156 49
VC0395_A1362 YP_001217305.1 hypothetical protein Not tested VPI-2 Protein 3e-156 49
VPI2_0012c ACA01829.1 methyl-accepting chemotaxis protein Not tested VPI-2 Protein 7e-156 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3785 YP_871409.1 hypothetical protein VFG1097 Protein 1e-156 49