Gene Information

Name : Shewana3_3697 (Shewana3_3697)
Accession : YP_871321.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4438771 - 4439376 bp
Length : 606 bp
Strand : +
Note : PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO4157 DNA-binding response regulator

DNA sequence : 
ATGTCCACCAAGCTGCCACTGTATTTAGTCGATGACGATGAGGCGATTCTCGATTCCTTAGGCTTTATGCTCGGACAATT
TGGCTATCAAGTACAAACCTTTAGCAGTGGTCGGGATTTTTTAGCTCAATGCCCATTAACCCAGGCGGGCTGCGTGATCT
TAGATAGTCGAATGCCGGAGATCACCGGCCAAGAAGTCCAGCAAAAGTTGCTCGAGACCCAAAGTCCGCTAGGGGTGATC
TTTCTAACGGGTCATGGGGATTTGCCCATGGCATTAAGCGCCTTTCGCAAGGGCGCCTGCGACTTTTTTCAAAAACCCGT
ATCCGGCAAAGCTTTGGTTCAAGCGATTGAAAAAGCGCATAAAGAAAGCCAAGCCAGTTTTGAACAACAACATCTGCAGC
AAAAATTTGCCCAACTGACCGAGCGCGAACAACAAGTATTAGCCCATGTGGTTCAAGGCATGACCAACAAGCAGATCTCC
GAAGCCATGTACTTATCTTTAAGAACCATCGAAGTCCATCGCGCTAAGATTATGAAAAAGCTCGAAGTTAGCAATATGGC
TGAACTGGTACAGCATTTAGCTCACCTCAATGCCCTATTGCCCTAG

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEVQQKLLETQSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAHKESQASFEQQHLQQKFAQLTEREQQVLAHVVQGMTNKQIS
EAMYLSLRTIEVHRAKIMKKLEVSNMAELVQHLAHLNALLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-36 43
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-36 43
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-36 43
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-36 43
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3697 YP_871321.1 two component LuxR family transcriptional regulator VFG0488 Protein 5e-37 43