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Name : Shewana3_3660 (Shewana3_3660) Accession : YP_871285.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4396084 - 4397844 bp Length : 1761 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO4109 MSHA biogenesis protein MshE DNA sequence : ATGAAACCCAGATTAAAGATGCGTTTGGGCGATCTGTTAGTTCAAGAATCGATTATTACCGAAGAGCAGCTACAACAAGC TTTGGGAGAGCAGCGCAAGACTGGGCATAAGCTCGGCCGCACCCTGATTGAGCTGCGCTCTATTACCGAAACCCAACTAC TGCAATTTTTGTCGCAGCAGCTAAATCTGCCACTGCTTGATATCAGCAAACGCCCAATCCCCGCTGAAGTGGTAAGCCTT ATCCCCGAGGTGCAAGCACGGCGTTTTCGTGCCCTTGCGGTGGAAGATCGGGGCGATACGGTATTAGTGGCTATGAGCGA CCCTGCAGATTTGCAGGCGCTCGACCATTTAGAAAACTTAATTACGCCTAAAAAGCTCAGTGTTGCGGTCGCGCCCGAGC AGCAGTTACTGCAAGCCTTTGATAACCTGTATCGTCGTACTGACCAAATCGCGCAAATTGCCGGTAAGCTCGAAGAGGAA TATGCCGCAGATCAAATGTTTGATCTGGCGAGCCTGACCTCAAGCGATAGCGATAATGAAACCACAGTCGTTAAGCTGCT GCAGTCGATTTTTGAAGATGCGGTGCAAATGCGCGCCTCGGATATTCATATTGAGCCCGGCGAAAAAGCCCTGCGGATCC GCCAACGTATCGATGGTCAGTTACACGAGACCATTCTAAACGAAGTCAATATCGCGGCGGCCTTAGTCTTGCGTCTTAAG CTTATGGCTGGGCTAGATATTTCTGAAAAACGTCTGCCGCAGGACGGGCGTTTCCATATGGAAATTAAGGGCCACAAGAT TGACGTGCGTATGTCGACTATGCCGATTTACCACGGCGAATCTGTGGTAATGCGTCTACTCGACCAATCCGCAGGCTTGC TGACCTTAAATGAGACAGGGATGCCGCCGCATATTTTGGCGCGTATCCGTAAGCAAATTAAACGTCCCCACGGCATGTTG CTGGTGACTGGACCAACGGGTAGCGGTAAAACCACCACCTTGTATGGCATCTTAAGTGAGCTCAATACTGCGGATCGCAA AATCATCACGGTAGAAGATCCGGTCGAATATCAATTGCCAAGGATCAACCAAGTTCAAGTTAACCATAAGATTGGGCTCG ATTTTTCGAACGTGCTGCGCACTACTTTGCGTCAAGACCCGGACATTATCATGGTCGGTGAGATGCGTGACCAAGAAACG GTGGAGATTGGTCTTAGGGGCGCACTAACGGGTCACTTTGTGTTATCCACATTGCACACTAACGATGCGGTAACCAGCGC GCTGCGTTTACTCGATATGGGCGCCGCCAGTTACTTAGTGGCTAGTGCGCTAAGGGTGATTATCGCCCAGCGTTTAGTGC GCCGCGTGTGCCATAACTGCGGGGTGGAATACCAGCCTACGGCGCAGGAAAAAGCCTGGCTGAATAGCGTGAGTCGTCAG GACTTTTCATCGGCTAAGTTCCGCATTGGCACTGGCTGCCAAAGCTGTAACGGCAGTGGTTATCGCGGCCGTATCGGTAT TTTTGAGATCCTCGAGTTGGATGAAAAGATGATCGATGCGATGCGTACCGGTAATCCACAGGATTTTGCCCGTGCAGCCC TGCAAAGCCCGAATTTTACTCCGCTTGCCGAGTCAGCACTGCAATATTTGAGCGAGGGCATGACGACGATTGAAGAGGTG GCTAAGCTAGTTGAGGATGTGAGTGAATCGCAGGTGCCACTCTCACGGGATATTATCAGTCAGCAAGGCGTTGAGGCGTA A Protein sequence : MKPRLKMRLGDLLVQESIITEEQLQQALGEQRKTGHKLGRTLIELRSITETQLLQFLSQQLNLPLLDISKRPIPAEVVSL IPEVQARRFRALAVEDRGDTVLVAMSDPADLQALDHLENLITPKKLSVAVAPEQQLLQAFDNLYRRTDQIAQIAGKLEEE YAADQMFDLASLTSSDSDNETTVVKLLQSIFEDAVQMRASDIHIEPGEKALRIRQRIDGQLHETILNEVNIAAALVLRLK LMAGLDISEKRLPQDGRFHMEIKGHKIDVRMSTMPIYHGESVVMRLLDQSAGLLTLNETGMPPHILARIRKQIKRPHGML LVTGPTGSGKTTTLYGILSELNTADRKIITVEDPVEYQLPRINQVQVNHKIGLDFSNVLRTTLRQDPDIIMVGEMRDQET VEIGLRGALTGHFVLSTLHTNDAVTSALRLLDMGAASYLVASALRVIIAQRLVRRVCHNCGVEYQPTAQEKAWLNSVSRQ DFSSAKFRIGTGCQSCNGSGYRGRIGIFEILELDEKMIDAMRTGNPQDFARAALQSPNFTPLAESALQYLSEGMTTIEEV AKLVEDVSESQVPLSRDIISQQGVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-76 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewana3_3660 | YP_871285.1 | type II secretion system protein E | VFG1876 | Protein | 4e-83 | 45 |
| Shewana3_3660 | YP_871285.1 | type II secretion system protein E | VFG2048 | Protein | 9e-77 | 42 |
| Shewana3_3660 | YP_871285.1 | type II secretion system protein E | VFG0182 | Protein | 6e-80 | 41 |
