Gene Information

Name : Shewana3_3572 (Shewana3_3572)
Accession : YP_871200.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 4284332 - 4287415 bp
Length : 3084 bp
Strand : +
Note : PFAM: acriflavin resistance protein; KEGG: ppr:PBPRA2318 hypothetical transporter, AcrB/D/F family

DNA sequence :
ATGAACATTGCTGAGTATTCCATCCGCCACAAAGTGATTAGCTGGATGTTTGTGCTACTGCTGCTCGTGGGCGGTGGTGT
GAGTTTTACCGGTCTTGGGCAATTAGAATTTCCAGAATTTACCATTAAAGAAGCCCTAGTGATCACCGCCTATCCGGGGG
CCTCACCCGAGCAAGTGGAAGAAGAAGTCACCCTTCCCCTCGAAGATGCACTGCAGCAACTCGATGCGGTTAAGCACGTG
ACCTCAATCAATAGTGCGGGCCTGTCGCAGATCCAAATAGAGATCAAAGAAACCTACGATAAAACCAGCCTGCCACAGGT
GTGGGATGAGGTGCGTCGTAAGGTGAACGACACCGCAGGACAACTGCCTCCCGGCACTAGTACGCCCAAGGTTTATGACG
ACTTTGGCGACGTGTACGGCATTTTGTTTAATCTCTCAGGGCCTGACTATAGCAACCGCGAATTAAGCAACTATGCCGAC
TATTTGCGCCGCGAACTGGTACTGGTGCCTGGGGTCAAAAAAGTCTCTGTCGCGGGCAGCGTAACCGAACAGGTAGTGAT
TGAAATATCACAACAAAAACTCTCTGCATTGGGGTTAGATCAAAGCTATATCTACGGCCTGATTAACAATCAGAACGTGG
TTTCTAATGCGGGCAGTTTAGTGGTTGGCGATAATCGTATTCGCATTCATCCCACGGGCGAATTTAGCAGTGTGCAGGAT
CTTGCGCGTCTGATCGTCAGTCCGCCCGGCAGCACCGAGCTTATCTATCTTGGCGACATTGCCCATATAGAAAAAGATTA
CGATGAAACCCCAGATGTGCTCTATCACAACCGTGGCGAAGCCGCCCTCTCCTTGGGGATTTCGTTTTCGAGTGGCGTCA
ACGTAGTCGAAGTAGGTAAAAGCGTTAGTGAGCGCCTTGCCGAGTTGGAGTCACAACGCCCAATTGGGATGAACTTAGAT
ACGGTCTATAACCAAAGCCTGGCGGTGGATGACACTGTAAATGGCTTTTTGATCAACCTATTAGAATCAATCGCCATCGT
TATTGCCGTACTGCTGCTGTTTATGGGCCTGCGCTCAGGCTTACTGATGGGCTTAATCCTGCTGCTGACGATTCTCGGCA
CTTTTATCGTGATGAAAGTACTGGGTATTGAGCTGCAACTGATCTCCCTCGGCGCCCTGATTATTGCACTTGGTATGTTG
GTCGATAACGCCATTGTGGTGACGGAAGGTATTTTGATTGGCCTGCGCCGGGGTAAGACTCGCCTCGAAGCCGCTAAACA
AATTGTGACGCAAACCCAGTGGCCGCTGCTTGGCGCCACAGTGATCGCGATTATCGCCTTCGCGCCGATTGGTTTATCGC
AAAATGCCGCGGGTGAGTTTTGTCGCTCGCTGTTCCAAGTGTTGATGATCTCTTTATTTATCAGTTGGATTACCGCGATC
ACCCTGACACCTTTCTTCTGTCACTTGCTGTTTAAAGACGCCCCAGCAGACGATGAAGAGCAGGATCCTTACAAAGGTTG
GTTCTTCAGCTTATACCGCGCGAGTTTAACCTTTGCCCTACGTTTTAGAATAGCCAGCATTTTATTGGTCGGCGCTATGC
TTGTTACCGCGGTAATTGGCTTTGGCCATATCAAAAATGTGTTCTTCCCAGCGTCAAACACGCCCATCTTCTTTGTCGAT
ATTTGGATGCCTGAAGGCACGGATATCAAAGGTACAGAACGTTTCACCGCCGATATTGAGCAGCTGCTACTCAAGCAAGC
CGAGGAGCAACACAGTGGCCTTAAACACTTAACCACAGTGATTGGCCAAGGTGCACAGCGTTTCGTCCTGCCCTATCAAC
CGGAAAAAGGTTACCCCGCCTTTGCCCAGTTGATCATCGAGATGGAGGATCTAGCGTCGCTCAAAGTCTATATGTCTGAG
TTAGAAAGACAGCTAAATCAACGGTTCCCGCAGGCACAATATCGATTCAAGAATATGGAAAACGGCCCGTCTCCGGCCGC
GAAGATTGAGGCGCGTTTCTACGGTGATGATCCTGAAGTGCTGCGTGCTCTGGGCGCTCAAGCCGAAGCGATTTTCCATG
CTGAGCCGAGTATGGATGGCGTTCGCCATGATTGGCGCAACCAAGTGCCTTTAATTCGTCCACAGCTGCAAAATGCGCAG
GCGAGGGAAACCGGGATCAGTAAGCAGGATCTGGATAATGCGCTGCTTATCAACTTTAGCGGCAAACAGATTGGCCTTTA
CCGCGAAACCAGCCATTTACTGCCCATCGTTGCCCGTGCCCCCGCCGAAGAGCGTTTGCAGGCGGACAGCCTGTGGAAAC
TGCAAATCTGGAGTAGCGAGCACAGCACCTTTGTGCCAGCTACCCAAGTGGTAAGCCAGTTTGAAACCCAGTGGGAAAAC
CCCTTAGTGAAACGTCGTGACCGGATGCGGATGTTAGCGGTTCTGGCCGATCCAAAGCTTGGCAGCGATGAAACCGCCGA
TTCTGTGCTCCGTAAAGTGAAGGATAAGGTTGAAGCCATCAGTATCCCCGCGGGTTATCACCTCGAATGGGGCGGCGAGT
ATGAGACCGCTGGCGAAGCCCAAACTGCGGTATTTAGCTCGATTCCATTAGGCTACTTGGCGATGTTTTTAATCACAGTG
TTCCTGTTTAACTCGGTACGCCAACCCTTAGTGATTTGGTTTACCGTACCACTGGCCTTGATTGGGGTCTCGGCGGGATT
ACTGATTTTCGACGCGCCCTTTAGCTTTATGGCACTGCTGGGGCTGCTGAGTCTATCGGGCATGGTGATTAAAAACGGCA
TTGTGTTAGTCGATCAAATCAACCTAGAACTTGACGAAGGCAAGCCGGCCTATATCGCCTTAGTCGATTCGAGTGTCAGC
CGTGTACGCCCCGTGATGATGGCAGCGATCACGACCATGCTCGGGATGATCCCGCTGATCCCCGACGCCTTTTTCGGCTC
GATGGCGATCACTATCATCTTTGGTTTAGGTTTTGCGTCGCTGCTGACCCTTATTGTGCTGCCAGTGATGTACAGCCTCG
CCTTTAATATCAAACCGAATGCGGTGGCGAGCGAGCAGCACTAG

Protein sequence :
MNIAEYSIRHKVISWMFVLLLLVGGGVSFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAVKHV
TSINSAGLSQIQIEIKETYDKTSLPQVWDEVRRKVNDTAGQLPPGTSTPKVYDDFGDVYGILFNLSGPDYSNRELSNYAD
YLRRELVLVPGVKKVSVAGSVTEQVVIEISQQKLSALGLDQSYIYGLINNQNVVSNAGSLVVGDNRIRIHPTGEFSSVQD
LARLIVSPPGSTELIYLGDIAHIEKDYDETPDVLYHNRGEAALSLGISFSSGVNVVEVGKSVSERLAELESQRPIGMNLD
TVYNQSLAVDDTVNGFLINLLESIAIVIAVLLLFMGLRSGLLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGML
VDNAIVVTEGILIGLRRGKTRLEAAKQIVTQTQWPLLGATVIAIIAFAPIGLSQNAAGEFCRSLFQVLMISLFISWITAI
TLTPFFCHLLFKDAPADDEEQDPYKGWFFSLYRASLTFALRFRIASILLVGAMLVTAVIGFGHIKNVFFPASNTPIFFVD
IWMPEGTDIKGTERFTADIEQLLLKQAEEQHSGLKHLTTVIGQGAQRFVLPYQPEKGYPAFAQLIIEMEDLASLKVYMSE
LERQLNQRFPQAQYRFKNMENGPSPAAKIEARFYGDDPEVLRALGAQAEAIFHAEPSMDGVRHDWRNQVPLIRPQLQNAQ
ARETGISKQDLDNALLINFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQIWSSEHSTFVPATQVVSQFETQWEN
PLVKRRDRMRMLAVLADPKLGSDETADSVLRKVKDKVEAISIPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITV
FLFNSVRQPLVIWFTVPLALIGVSAGLLIFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELDEGKPAYIALVDSSVS
RVRPVMMAAITTMLGMIPLIPDAFFGSMAITIIFGLGFASLLTLIVLPVMYSLAFNIKPNAVASEQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 3e-180 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3572 YP_871200.1 acriflavin resistance protein BAC0519 Protein 0.0 55
Shewana3_3572 YP_871200.1 acriflavin resistance protein BAC0428 Protein 0.0 54
Shewana3_3572 YP_871200.1 acriflavin resistance protein BAC0526 Protein 0.0 53
Shewana3_3572 YP_871200.1 acriflavin resistance protein BAC0425 Protein 1e-180 42