Gene Information

Name : Shewana3_3421 (Shewana3_3421)
Accession : YP_871050.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4097120 - 4097791 bp
Length : 672 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0857 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCAGAAGTAGCCAAACTTATCCAAGTGAGTAAAAGTTTTCGCGACGGCGAGCAGCGCCATACAGTACTGCAAGCCGT
CGATTTAACCTTGCATCGCGGCGAAACCATCGCACTCACGGGCCCCAGCGGCAGCGGTAAAAGCACACTGCTAAATTTGA
TCGCAGGCTTTGAAACGCCAGACAGCGGCCAGATAGTGTTGAATAATCAATCCACCCAAGATTGGCAAGACAAACACTGG
AGCGAGTTCAGGCACAACCATTTGGGCGTGGTGTTTCAACAATTTAATCTGCTGACTCCGCTCAATGTGAGAAACAACAT
AGGTTTTTCACTCAATCTCAACGGCGCCAGTTGGAATCCTTGGTGCGATTATCTCGTCGACAAATTGGGGCTGGCTTCGC
TGCTCAATCGGCAGGTCGAAGCGCTTTCAGGCGGGCAACAGCAAAGGGTCGCTATCGCCAGAGCCTTAGCCCACAACCCG
AGTTTACTGCTGGCCGACGAACCCACGGGCAACCTCGATGATGAATCGGGAAAACAGGTGATGTCGCTGCTATGCGAACT
GGCCAAAGAAAGCCAAACCAGCATACTCATGGTCACCCACAGTGAAGAATGCGCCGCTTTTATGCACAAGCGCTGGCATC
TTTCCCACGCCGCTGTGTCTATCTCCGGTTAA

Protein sequence : 
MSEVAKLIQVSKSFRDGEQRHTVLQAVDLTLHRGETIALTGPSGSGKSTLLNLIAGFETPDSGQIVLNNQSTQDWQDKHW
SEFRHNHLGVVFQQFNLLTPLNVRNNIGFSLNLNGASWNPWCDYLVDKLGLASLLNRQVEALSGGQQQRVAIARALAHNP
SLLLADEPTGNLDDESGKQVMSLLCELAKESQTSILMVTHSEECAAFMHKRWHLSHAAVSISG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3421 YP_871050.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-40 43
Shewana3_3421 YP_871050.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3421 YP_871050.1 ABC transporter-like protein VFG2059 Protein 7e-22 42