Gene Information

Name : Shewana3_3331 (Shewana3_3331)
Accession : YP_870961.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3992576 - 3993478 bp
Length : 903 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO0950 integrase/recombinase XerD

DNA sequence :
GTGGCTAAAACCTATCAGTGCGATCCGCTTATCGATGCCTTTCTCGATGATCTTTGGTCCAGCAAGGGCTTAAGTGATAA
CACCTTGAGTGCTTATCGCACCGATTTACGCCATTTTGACCGCTACCAACAGGGCCAAGGCCTGCGGTTAATCGAGGTAG
GGCAAGCCGATGTGCGTGCCTATTTAGCCTACCGCGTCGAGCAACAATTTGCCCGCACCAGTAGTGCACGTTTGCTCAGT
AGTTTACGGCGTTTTTACACCTACTTACTGCAAACCAAACAGATTGCTGGCGATCCTATGGCGTTAATTGAATCGCCTAA
ATTGAGTCGGCAGTTGCCCGATTCCTTAAGTGAGTCACAGGTCGATAGATTGCTGGCCGAGCCCAATGTGGATGACCCCG
TCGAGTGCCGTGATAAAGCCATGCTCGAACTCTTATACGCCACTGGATTACGGGTGAGTGAGCTGGTGGGACTCACCATG
GAGCAGATGAGTTTGCGCCAAGGTTTAGTGCGGATTGTGGGTAAGGGCGGTAAAGAGCGCTTAGTGCCCATGGGCGAGCT
GGCCATTACCGAGGTCGAGCGTTACTTAAGCTTTGCGCGCTATGAACTCTTGGGCAATATCCAGTCCGATGTGGTATTTC
CTTCGAAGCGGGCACAGATGATGACAAGGCAAACCTTTTGGCATCGGATCAAGCTCTATGCGAGTCGCGCTGGCATCGAA
ACCGAGCTTTCGCCCCATACCCTGCGCCATGCCTTTGCCACCCACTTACTTAACCATGGCGCCGACCTTAGGGTGGTGCA
ATTACTCTTAGGTCACAGTGACTTATCGACCACTCAAATTTATACCCATGTGGCGCGAGCGAGATTACAAGAGTTGCACC
AACAACATCATCCTCGCGGTTAA

Protein sequence :
MAKTYQCDPLIDAFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQQGQGLRLIEVGQADVRAYLAYRVEQQFARTSSARLLS
SLRRFYTYLLQTKQIAGDPMALIESPKLSRQLPDSLSESQVDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTM
EQMSLRQGLVRIVGKGGKERLVPMGELAITEVERYLSFARYELLGNIQSDVVFPSKRAQMMTRQTFWHRIKLYASRAGIE
TELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 57