Gene Information

Name : Shewana3_3260 (Shewana3_3260)
Accession : YP_870890.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3902456 - 3903196 bp
Length : 741 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3692 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTTATCAATGAAGAATATCAGCAAGGTTTTTAAAACGGACTTAGTGGAAACCCATGCGTTGCGGGATTTCAACCTTGA
GGTGAACGAGGGCGAGTTTGTGGCGGTTACGGGGCCTTCGGGCTCAGGTAAAACCACCTTCTTAAATATCGCAGGCTTGC
TCGAAGGCTTCACCCATGGGGATTATTTTTTAGATGGGATTAATGTCTCGAACCTCAGTGATAACAAGAGTGCCGCCGTA
CGCAACGAGAAGATTGGCTTTATCTTCCAAGGCTTTAACTTGATCCCCGATCTTAATCTCGCGGAAAACATTGAAGTGCC
GCTGCGCTACCGTGGTTTTAGTGCCAAGGAGCGTAAACGCCGTGTGGAGCAAGCGTTAGAGCAAGTGGGCTTAGGCGCGC
GGATGAAGCATTTGCCGACCCAATTATCCGGCGGTCAACAGCAAAGGGTGGCGATTGCTCGCGCTTTAGCGGGGGAGCCT
CGTTTTCTGCTCGCCGACGAACCTACGGGTAACCTCGACAGTTTAATGGCCCGCCAAGTGATGGAATTATTAGAGAATAT
TAATCAGTCTGGCACCACCATCATCATGGTGACTCACGATCCTGAACTGGCTCGCCGTGCCCAGCGCAATATCCAAATTG
TCGATGGTCAAGTCTGCGACTTTACCATGTATCAACCTAATGCGGCCCGCAGTGCAAGCCACGGTAGTGTCGATAAACTG
GTTGCTAACGCCCAAGGCTAG

Protein sequence : 
MLSMKNISKVFKTDLVETHALRDFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSAAV
RNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFSAKERKRRVEQALEQVGLGARMKHLPTQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLENINQSGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQPNAARSASHGSVDKL
VANAQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3260 YP_870890.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-45 52
Shewana3_3260 YP_870890.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-52 50
Shewana3_3260 YP_870890.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-38 46
Shewana3_3260 YP_870890.1 ABC transporter-like protein CP001581.1.gene598.p Protein 4e-30 41