Gene Information

Name : Shewana3_3105 (Shewana3_3105)
Accession : YP_870735.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 3723574 - 3725070 bp
Length : 1497 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: son:SO3496 aldehyde dehydrogenase

DNA sequence :
ATGAGTACACCTAAAAAACGGAGTGATTGGGAAAGCCTCGCTGCTAGCCTAGCAATCAATGGCAAGGCTTATATCAATGG
CGAATACCGCGATGCGGCAGCGGGCAGTACCTTTGACTGTGTCAGCCCGATCGACGGACGCGTATTAGCCAAGGTCGCCA
GTTGCGATCAAATGGACGCCAATATTGCCGTCGCTAATGCCCGTGAGGTGTTTGAATCAGGCGTGTGGTCAAAGACTGCC
CCCGTTAAACGTAAGCAAGTGATGATCCGTTTTGCCGAGTTATTGGAGGAAAATGCCAATGAACTCGCCCTGTTAGAAAC
CTTGGACATGGGTAAGCCTATCCGTTTTTCAAAGGCGGTAGATATTGCCGGTGCCGCCCGTGCTATCCGTTGGTCGGGTG
AAGCCGTTGATAAACTCTACGACGAGCTGGCGCCGACGGCACATAATGAAATCGGTATGATCACCCGCGAACCCGTAGGT
GTGGTGGCGGCGATTGTGCCTTGGAACTTCCCGTTATTGATGGCCTGTTGGAAGCTGGGGCCAGCACTGGCGACGGGTAA
CAGTGTTATTCTAAAACCCTCTGAGAAATCCCCCTTAACGGCCATTCGTATCGCCGAGCTTGCGGTACAGGCAGGGATCC
CTAAGGGCGTGCTAAACGTATTGCCGGGTTATGGGCATACGGTCGGCAAGGCGCTGGCGCTGCATATGGATGTGGATACC
TTAGTCTTTACTGGCTCAACAAAAATCGCTAAGCAATTAATGATTTATGCGGGCGAATCGAATATGAAACGAGTGTGGCT
CGAGGCTGGCGGTAAGAGCCCGAACATTGTATTTAACGATGCGCCCGATCTTAAAGCGGCGGCGGTGGCGGCCGCCGAAG
CCATTGCTTTTAACCAAGGTGAAGTCTGTACTGCGGGCTCGCGTTTGCTGGTGGAGTCTGGGGTTAAAGATCAACTGATT
GAGCTTATCGCCGAAGAACTCGCCTCGTGGCAACCTGGGCATCCGCTGGATCCCGCTACTGTTAGCGGCGCAGTGGTCGA
TAAGCAGCAATTAGATACCATCTTAAGCTATATCAAGGCGGGCCAAGACGAAGGCGCCAGTTTAGTCCATGGTGGACAGC
AAGTGCTGGCCGAAACGGGCGGCGTGTATGTGCAGCCCACTATCTTTAGCCAAGTAAACAACAAGATGAAAATCGCCAGC
GAGGAAATCTTTGGCCCTGTGTTATCTGTCATTGAATTCAATGGCATGGAAGAGGCGATTGCGATAGCCAACGACACCAT
TTACGGCTTAGCGGCAGGGGTGTGGACGGCGGATATCAGCAAGGCGCACAAAACCGCGAAGGCGCTGCGTTCGGGAATGG
TGTGGATTAACCATTATGATGGTGGTGATATGACGGCACCTTTCGGTGGTTATAAACAATCGGGCAATGGCCGCGATAAA
TCCATGCACTCCTTCGACAAATACACCGAAATCAAAGCGACTTGGATAGCCCTCTAA

Protein sequence :
MSTPKKRSDWESLAASLAINGKAYINGEYRDAAAGSTFDCVSPIDGRVLAKVASCDQMDANIAVANAREVFESGVWSKTA
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDIAGAARAIRWSGEAVDKLYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPLLMACWKLGPALATGNSVILKPSEKSPLTAIRIAELAVQAGIPKGVLNVLPGYGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDQLI
ELIAEELASWQPGHPLDPATVSGAVVDKQQLDTILSYIKAGQDEGASLVHGGQQVLAETGGVYVQPTIFSQVNNKMKIAS
EEIFGPVLSVIEFNGMEEAIAIANDTIYGLAAGVWTADISKAHKTAKALRSGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SMHSFDKYTEIKATWIAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-119 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-73 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-73 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-73 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-73 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_3105 YP_870735.1 aldehyde dehydrogenase VFG0082 Protein 1e-72 41