Gene Information

Name : Shewana3_3092 (Shewana3_3092)
Accession : YP_870722.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : succinate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 3708956 - 3710404 bp
Length : 1449 bp
Strand : -
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+)

DNA sequence :
GTGTTGTTAAAAGACCCGAGTCTGCTGCGTCAGCAATGTTATATCAATGGTCAGTGGTGCGATGCGCAGTCAAAAGAAAC
TGTCGCTATCGCCAATCCCGCGACGGGCGCGGTGATCGCTAGTGTTCCTGTGATGGGGCAAGCCGAAACTCAAGCGGCAA
TTGCGGCAGCCGAAGCGGCCTTGCCCGCATGGCGAGCATTAACCGCAAAAGAGCGTGGTGTCAAGCTGCGTCGTTGGTTT
GAGTTACTCAATGAAAATAGTGATGATTTAGCGTTAATGATGACCTCTGAGCAGGGCAAGCCCCTTGCAGAAGCTAAGGG
TGAAGTCACCTACGCCGCCTCTTTTATCGAATGGTTCGCCGAAGAGGCGAAGCGCGTCTATGGCGATACGATTCCTGGGC
ATCAGGGCGATAAACGTATCATGGTGATCAAGCAGCCCGTGGGCGTGACTGCGGCTATTACCCCTTGGAACTTCCCTGCT
GCGATGATCACTCGTAAAGCCGCGCCAGCACTGGCAGCGGGTTGTACTATGGTGGTGAAACCTGCACCGCAAACGCCTTT
TACTGCATTAGCCTTAGCTGTGCTTGCCGAGCGTGCGGGGATCCCCGCTGGGGTATTCAGCGTGATCACTGGCGATGCCA
TCGGCATTGGTAATGAGATGTGCAGCAATCCAGTTGTGCGTAAGTTGTCTTTCACCGGCTCGACCCAGGTGGGCATTAAG
TTGATGGAACAATGCGCGCCGACACTGAAGAAATTATCTTTAGAATTAGGCGGTAACGCGCCATTTATCGTATTCGACGA
TGCCAATATCGATGCGGCGGTCGAAGGCGCGATGATCGCTAAGTATCGCAATGCGGGGCAAACCTGCGTCTGCGCTAACC
GCATTTATGTTCAGGCGGGCGTGTATGACGAATTTGCTCGCAAGCTCAGTATTGCCGTGGGTAAATTAAAGGTGGGTGAG
GGCATTGGCGAGGGCGTAACTACGGGACCGCTTATCAATTGCGCGGCGGTCGAAAAAGTCCAGAGCCATCTTGAGGATGC
GCTCAGCAAAGGGGCGACTGTGGTTGCGGGCGGTAAGCCCCATAGCTTAGGTGGCAACTTCTTCGAGCCAACGGTACTGA
CGAATGTCGATAGCAGTATGCGCGTTGCCCGTGAAGAAACCTTTGGCCCACTGGCGCCGCTGTTTAAGTTTACCGATGTG
GACGATGTGATTAAGCAAGCCAATGATACCGAGTTTGGATTAGCGGCTTATTTTTATGGCCGTGATATCTCACTCGTGTG
GAAAGTGACCGAGGCATTGGAATACGGCATGGTGGGCGTCAACACTGGCTTGATTTCCACCGAAGTCGCGCCGTTTGGCG
GAATGAAATCCTCAGGGCTCGGTCGAGAAGGCTCTAAGTTCGGCATCGAAGAATATTTAGAAATCAAATATATCTGCATG
TCTGTTTAA

Protein sequence :
MLLKDPSLLRQQCYINGQWCDAQSKETVAIANPATGAVIASVPVMGQAETQAAIAAAEAALPAWRALTAKERGVKLRRWF
ELLNENSDDLALMMTSEQGKPLAEAKGEVTYAASFIEWFAEEAKRVYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAVLAERAGIPAGVFSVITGDAIGIGNEMCSNPVVRKLSFTGSTQVGIK
LMEQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAGVYDEFARKLSIAVGKLKVGE
GIGEGVTTGPLINCAAVEKVQSHLEDALSKGATVVAGGKPHSLGGNFFEPTVLTNVDSSMRVAREETFGPLAPLFKFTDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVTEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKFGIEEYLEIKYICM
SV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 6e-143 66
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 4e-75 41