Gene Information

Name : Shewana3_0250 (Shewana3_0250)
Accession : YP_867899.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 280166 - 281686 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase

DNA sequence :
ATGATTTATGCTCAACCCGGAACCGCTGGTGCCATCGTTAACTTTAAAGAAAAATACGCCAACTTTATCGGTGGCAAATG
GGTCGCCCCAGTCAACGGCGATTACTTTGAAAATCGCTCTCCCGTCAATGGTCAAAACTTCTGTAAAATTCCCCGCTCCG
ACTACCGCGATATCGAACTGGCGCTCGATGCTGCCCACGCAGCTAAGGATGCTTGGGGCAAAACCTCAGTCACCGAGCGT
GCCAATTTACTGTTGCGTATCGCCGATCGCGTTGAGCAAAATCTCGAATACTTAGCCGTTGCCGAAACCTGGGAAAACGG
TAAAGCAGTGCGTGAAACCCTCAACGCCGACTTACCTCTGTTTGTCGACCATTTCCGTTACTTCGCCGGCTGCATTCGAG
CACAGGAAGGAAGCGCAGCCGATATCGATGGCAACACCGTCAGCTACCACTTCCCAGAGCCATTAGGTGTCGTCGGGCAA
ATCATTCCGTGGAACTTCCCGTTGTTGATGGCTGCGTGGAAAATCGCCCCCGCACTCGCCGCGGGCAACTGCGTAGTACT
CAAACCCGCAGAGCAAACGCCCGTATCTATCCTTGTGCTGCTCGAACTGATTGAAGATCTGCTGCCGCCCGGCATCCTTA
ACGTCGTCAACGGTTTTGGCGCCGAAGCGGGTCAAGCCCTCGCCACCAGCAAACGCATCGCTAAACTGGCCTTTACTGGC
TCCACCGAAGTCGGTTACCACATCTTAAAATGTGCCGCGGAATCGCTGATCCCATCGACAGTCGAACTCGGCGGTAAATC
GCCTAACCTGTATTTCGCCGATGTGATGGACCACGAAGACGAGTATTTAGATAAGGCCGTCGAAGGCATGTTGCTGGCCT
TCTTCAACCAAGGTGAAGTCTGTACTTGCCCATCACGGGTATTGATCCAAGAGTCGATTTACGATCGCTTTATCGAAAAA
GTTCTCGCCCGTGCGCAAACCATCAAGCAGGGCAACCCGCTGGATACCGCCACCCAAGTGGGCGCACAGGCCTCCCAAGA
ACAGTTCGATAAGATTTTAAGCTATCTCGCAATTGGTAAAGATGAAGGCGCACAGGTGCTCTTAGGCGGCTCGCTCTGCC
AACTCGAAGGCGATCAAAGCAAGGGCTATTACATCAGCCCAACGATCATGAAAGGTCATAATAAGATGCGGATTTTCCAA
GAGGAAATCTTCGGTCCGGTTATTTCGGTCACCACCTTCAAGGATGAAGCCGAAGCCTTGGCAATTGCCAACGATACCGA
ATACGGCCTTGGTGCGGGTGTATGGACGCGGGATATGAACCGCGCTCAGCGTCTAGGTCGAGGCATTCAAGCGGGTCGAG
TTTGGATTAACTGCTACCACGCCTATCCCGCCCACGCAGCCTTTGGTGGTTATAAGAAGTCAGGCATCGGCCGTGAAACC
CACAAGATGATGCTTAATCACTATCAAAACACCAAAAACCTATTGGTGAGCTACGATATCAATCCGCTCGGGTTCTTCTA
A

Protein sequence :
MIYAQPGTAGAIVNFKEKYANFIGGKWVAPVNGDYFENRSPVNGQNFCKIPRSDYRDIELALDAAHAAKDAWGKTSVTER
ANLLLRIADRVEQNLEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPPGILNVVNGFGAEAGQALATSKRIAKLAFTG
STEVGYHILKCAAESLIPSTVELGGKSPNLYFADVMDHEDEYLDKAVEGMLLAFFNQGEVCTCPSRVLIQESIYDRFIEK
VLARAQTIKQGNPLDTATQVGAQASQEQFDKILSYLAIGKDEGAQVLLGGSLCQLEGDQSKGYYISPTIMKGHNKMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNRAQRLGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLNHYQNTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-159 70
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-169 69
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-169 69
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-169 69
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-168 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_0250 YP_867899.1 aldehyde dehydrogenase VFG0082 Protein 5e-160 70